Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Gm43347-201ENSMUST00000200226 580 ntBASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Naf1Q3UMQ8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Gm27867-201ENSMUST00000184778 125 ntBASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Naf1Q3UMQ8 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.55■□□□□ 0.24
Naf1Q3UMQ8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Gm12644-201ENSMUST00000119935 606 ntBASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Naf1Q3UMQ8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Gm13884-201ENSMUST00000118103 829 ntBASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Gm15165-201ENSMUST00000118140 502 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms