Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim63Q38HM4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim63Q38HM4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.52□□□□□ -0.24
Trim63Q38HM4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim63Q38HM4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Gm40881-201ENSMUST00000223397 166 ntBASIC13.52□□□□□ -0.25
Trim63Q38HM4 Gm10232-201ENSMUST00000089221 720 ntBASIC13.52□□□□□ -0.25
Trim63Q38HM4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.52□□□□□ -0.25
Trim63Q38HM4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim63Q38HM4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms