Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tpm2P58774 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.8■□□□□ 0.6
Tpm2P58774 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.8■□□□□ 0.6
Tpm2P58774 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tpm2P58774 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tpm2P58774 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tpm2P58774 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm2P58774 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tpm2P58774 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.79■□□□□ 0.6
Tpm2P58774 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Gm12382-201ENSMUST00000122005 922 ntBASIC18.79■□□□□ 0.6
Tpm2P58774 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Gm4974-201ENSMUST00000209974 875 ntBASIC18.79■□□□□ 0.6
Tpm2P58774 Gm18025-201ENSMUST00000221733 862 ntBASIC18.79■□□□□ 0.6
Tpm2P58774 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Tpm2P58774 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm2P58774 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tpm2P58774 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.78■□□□□ 0.6
Tpm2P58774 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.78■□□□□ 0.6
Tpm2P58774 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.78■□□□□ 0.6
Tpm2P58774 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.78■□□□□ 0.6
Tpm2P58774 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.78■□□□□ 0.6
Tpm2P58774 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm2P58774 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.78■□□□□ 0.6
Tpm2P58774 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Tpm2P58774 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tpm2P58774 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Gm42545-201ENSMUST00000202755 922 ntBASIC18.77■□□□□ 0.6
Tpm2P58774 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tpm2P58774 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tpm2P58774 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm2P58774 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tpm2P58774 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.77■□□□□ 0.59
Tpm2P58774 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Tpm2P58774 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tpm2P58774 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tpm2P58774 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tpm2P58774 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.76■□□□□ 0.59
Tpm2P58774 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tpm2P58774 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tpm2P58774 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.76■□□□□ 0.59
Tpm2P58774 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.76■□□□□ 0.59
Tpm2P58774 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.76■□□□□ 0.59
Tpm2P58774 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm2P58774 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms