Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Xcl1P47993 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Xcl1P47993 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Xcl1P47993 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Xcl1P47993 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Xcl1P47993 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Xcl1P47993 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Xcl1P47993 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC10.68□□□□□ -0.7
Xcl1P47993 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC10.68□□□□□ -0.7
Xcl1P47993 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC10.68□□□□□ -0.7
Xcl1P47993 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC10.68□□□□□ -0.7
Xcl1P47993 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.68□□□□□ -0.7
Xcl1P47993 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC10.68□□□□□ -0.7
Xcl1P47993 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Xcl1P47993 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Xcl1P47993 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Xcl1P47993 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Xcl1P47993 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC10.67□□□□□ -0.7
Xcl1P47993 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Gm22325-201ENSMUST00000158904 308 ntBASIC10.67□□□□□ -0.7
Xcl1P47993 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Xcl1P47993 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Xcl1P47993 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 AC160393.1-201ENSMUST00000218378 1279 ntBASIC10.67□□□□□ -0.7
Xcl1P47993 Gm10232-201ENSMUST00000089221 720 ntBASIC10.67□□□□□ -0.7
Xcl1P47993 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Xcl1P47993 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Xcl1P47993 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Xcl1P47993 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Xcl1P47993 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Xcl1P47993 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC10.67□□□□□ -0.7
Xcl1P47993 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Xcl1P47993 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.66□□□□□ -0.7
Xcl1P47993 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.66□□□□□ -0.7
Xcl1P47993 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Xcl1P47993 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Xcl1P47993 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Xcl1P47993 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC10.66□□□□□ -0.7
Xcl1P47993 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Xcl1P47993 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms