Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.11■□□□□ 0.01
Foxa1P35582 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Foxa1P35582 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.11■□□□□ 0.01
Foxa1P35582 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
Foxa1P35582 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Foxa1P35582 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Foxa1P35582 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Foxa1P35582 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Foxa1P35582 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Foxa1P35582 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Foxa1P35582 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Foxa1P35582 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Foxa1P35582 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.1■□□□□ 0.01
Foxa1P35582 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.1■□□□□ 0.01
Foxa1P35582 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.1■□□□□ 0.01
Foxa1P35582 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa1P35582 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.09■□□□□ 0.01
Foxa1P35582 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Foxa1P35582 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.09■□□□□ 0.01
Foxa1P35582 Gm36967-201ENSMUST00000193814 266 ntBASIC15.09■□□□□ 0.01
Foxa1P35582 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa1P35582 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Foxa1P35582 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Foxa1P35582 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Foxa1P35582 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Foxa1P35582 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Foxa1P35582 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Foxa1P35582 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Gm10052-201ENSMUST00000168019 960 ntBASIC15.08■□□□□ 0
Foxa1P35582 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.08■□□□□ 0
Foxa1P35582 Gm45328-201ENSMUST00000210942 917 ntBASIC15.08■□□□□ 0
Foxa1P35582 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Gm7729-201ENSMUST00000050143 801 ntBASIC15.08■□□□□ 0
Foxa1P35582 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.08■□□□□ 0
Foxa1P35582 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.08■□□□□ 0
Foxa1P35582 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.08■□□□□ 0
Foxa1P35582 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Foxa1P35582 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Foxa1P35582 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Foxa1P35582 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms