Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.62□□□□□ -0.23
Col8a2P25318 Gm10052-201ENSMUST00000168019 960 ntBASIC13.62□□□□□ -0.23
Col8a2P25318 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.62□□□□□ -0.23
Col8a2P25318 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.62□□□□□ -0.23
Col8a2P25318 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.62□□□□□ -0.23
Col8a2P25318 Gm7729-201ENSMUST00000050143 801 ntBASIC13.62□□□□□ -0.23
Col8a2P25318 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col8a2P25318 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col8a2P25318 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col8a2P25318 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.62□□□□□ -0.23
Col8a2P25318 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.62□□□□□ -0.23
Col8a2P25318 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.62□□□□□ -0.23
Col8a2P25318 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col8a2P25318 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.61□□□□□ -0.23
Col8a2P25318 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Col8a2P25318 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.61□□□□□ -0.23
Col8a2P25318 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.61□□□□□ -0.23
Col8a2P25318 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.61□□□□□ -0.23
Col8a2P25318 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.61□□□□□ -0.23
Col8a2P25318 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.61□□□□□ -0.23
Col8a2P25318 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Col8a2P25318 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.61□□□□□ -0.23
Col8a2P25318 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Col8a2P25318 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col8a2P25318 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col8a2P25318 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col8a2P25318 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col8a2P25318 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col8a2P25318 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.6□□□□□ -0.23
Col8a2P25318 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.6□□□□□ -0.23
Col8a2P25318 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.6□□□□□ -0.23
Col8a2P25318 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Gm44430-201ENSMUST00000203376 995 ntBASIC13.6□□□□□ -0.23
Col8a2P25318 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Col8a2P25318 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col8a2P25318 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.6□□□□□ -0.23
Col8a2P25318 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col8a2P25318 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col8a2P25318 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms