Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PdgfrbP05622 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PdgfrbP05622 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PdgfrbP05622 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.51■□□□□ 0.23
PdgfrbP05622 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PdgfrbP05622 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PdgfrbP05622 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PdgfrbP05622 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PdgfrbP05622 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PdgfrbP05622 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PdgfrbP05622 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PdgfrbP05622 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PdgfrbP05622 Mir770-201ENSMUST00000103252 94 ntBASIC16.5■□□□□ 0.23
PdgfrbP05622 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.5■□□□□ 0.23
PdgfrbP05622 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PdgfrbP05622 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PdgfrbP05622 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PdgfrbP05622 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PdgfrbP05622 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PdgfrbP05622 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PdgfrbP05622 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.5■□□□□ 0.23
PdgfrbP05622 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PdgfrbP05622 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PdgfrbP05622 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.5■□□□□ 0.23
PdgfrbP05622 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.49■□□□□ 0.23
PdgfrbP05622 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.49■□□□□ 0.23
PdgfrbP05622 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PdgfrbP05622 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PdgfrbP05622 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.48■□□□□ 0.23
PdgfrbP05622 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.48■□□□□ 0.23
PdgfrbP05622 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.48■□□□□ 0.23
PdgfrbP05622 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.48■□□□□ 0.23
PdgfrbP05622 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.48■□□□□ 0.23
PdgfrbP05622 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.48■□□□□ 0.23
PdgfrbP05622 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.48■□□□□ 0.23
PdgfrbP05622 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.48■□□□□ 0.23
PdgfrbP05622 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PdgfrbP05622 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfrbP05622 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms