Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.12■□□□□ 0.01
Cops4O88544 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.12■□□□□ 0.01
Cops4O88544 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cops4O88544 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.12■□□□□ 0.01
Cops4O88544 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.12■□□□□ 0.01
Cops4O88544 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.12■□□□□ 0.01
Cops4O88544 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.12■□□□□ 0.01
Cops4O88544 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.12■□□□□ 0.01
Cops4O88544 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cops4O88544 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cops4O88544 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.11■□□□□ 0.01
Cops4O88544 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cops4O88544 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.11■□□□□ 0.01
Cops4O88544 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.11■□□□□ 0.01
Cops4O88544 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.11■□□□□ 0.01
Cops4O88544 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.11■□□□□ 0.01
Cops4O88544 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Gm37856-201ENSMUST00000191634 999 ntBASIC15.11■□□□□ 0.01
Cops4O88544 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cops4O88544 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cops4O88544 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cops4O88544 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Cops4O88544 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cops4O88544 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Cops4O88544 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.1■□□□□ 0.01
Cops4O88544 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Cops4O88544 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Cops4O88544 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Cops4O88544 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cops4O88544 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Cops4O88544 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cops4O88544 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.09■□□□□ 0.01
Cops4O88544 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.09■□□□□ 0.01
Cops4O88544 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cops4O88544 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cops4O88544 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms