Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Pdlim3O70209 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.84□□□□□ -0.03
Pdlim3O70209 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Pdlim3O70209 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim3O70209 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim3O70209 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim3O70209 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim3O70209 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pdlim3O70209 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pdlim3O70209 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.83□□□□□ -0.04
Pdlim3O70209 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pdlim3O70209 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.83□□□□□ -0.04
Pdlim3O70209 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.83□□□□□ -0.04
Pdlim3O70209 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim3O70209 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.82□□□□□ -0.04
Pdlim3O70209 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pdlim3O70209 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pdlim3O70209 Prob1-201ENSMUST00000097619 3021 ntBASIC14.82□□□□□ -0.04
Pdlim3O70209 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pdlim3O70209 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim3O70209 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pdlim3O70209 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Pdlim3O70209 Gm10698-201ENSMUST00000182663 604 ntBASIC14.81□□□□□ -0.04
Pdlim3O70209 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.81□□□□□ -0.04
Pdlim3O70209 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.81□□□□□ -0.04
Pdlim3O70209 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Pdlim3O70209 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.81□□□□□ -0.04
Pdlim3O70209 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.81□□□□□ -0.04
Pdlim3O70209 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pdlim3O70209 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim3O70209 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Pdlim3O70209 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Pdlim3O70209 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pdlim3O70209 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pdlim3O70209 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.8□□□□□ -0.04
Pdlim3O70209 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.8□□□□□ -0.04
Pdlim3O70209 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.8□□□□□ -0.04
Pdlim3O70209 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pdlim3O70209 Actl10-202ENSMUST00000226583 1501 ntBASIC14.8□□□□□ -0.04
Pdlim3O70209 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.8□□□□□ -0.04
Pdlim3O70209 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms