Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Matn3O35701 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.89□□□□□ -0.03
Matn3O35701 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.89□□□□□ -0.03
Matn3O35701 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.89□□□□□ -0.03
Matn3O35701 Mtag2-201ENSMUST00000058665 714 ntBASIC14.89□□□□□ -0.03
Matn3O35701 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.89□□□□□ -0.03
Matn3O35701 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.89□□□□□ -0.03
Matn3O35701 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Matn3O35701 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.89□□□□□ -0.03
Matn3O35701 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.88□□□□□ -0.03
Matn3O35701 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Matn3O35701 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Gm12527-201ENSMUST00000117967 564 ntBASIC14.88□□□□□ -0.03
Matn3O35701 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Gm6211-202ENSMUST00000167849 925 ntBASIC14.88□□□□□ -0.03
Matn3O35701 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Mir6349-201ENSMUST00000184059 97 ntBASIC14.88□□□□□ -0.03
Matn3O35701 Gm44549-201ENSMUST00000208351 577 ntBASIC14.88□□□□□ -0.03
Matn3O35701 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Matn3O35701 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Matn3O35701 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Matn3O35701 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Matn3O35701 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Matn3O35701 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Matn3O35701 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.87□□□□□ -0.03
Matn3O35701 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.87□□□□□ -0.03
Matn3O35701 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Gm22240-201ENSMUST00000175225 82 ntBASIC14.87□□□□□ -0.03
Matn3O35701 Gm8520-201ENSMUST00000186517 868 ntBASIC14.87□□□□□ -0.03
Matn3O35701 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.87□□□□□ -0.03
Matn3O35701 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Matn3O35701 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Matn3O35701 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Matn3O35701 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Matn3O35701 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.86□□□□□ -0.03
Matn3O35701 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.86□□□□□ -0.03
Matn3O35701 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Matn3O35701 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Matn3O35701 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Matn3O35701 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Matn3O35701 Gm11927-201ENSMUST00000118472 759 ntBASIC14.86□□□□□ -0.03
Matn3O35701 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.86□□□□□ -0.03
Matn3O35701 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Matn3O35701 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.86□□□□□ -0.03
Matn3O35701 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Matn3O35701 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms