Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.95□□□□□ -0.34
Efnb3O35393 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Efnb3O35393 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Efnb3O35393 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Efnb3O35393 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Efnb3O35393 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Efnb3O35393 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.94□□□□□ -0.34
Efnb3O35393 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Gm13168-201ENSMUST00000121771 632 ntBASIC12.94□□□□□ -0.34
Efnb3O35393 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.94□□□□□ -0.34
Efnb3O35393 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Efnb3O35393 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.94□□□□□ -0.34
Efnb3O35393 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Efnb3O35393 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Efnb3O35393 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.94□□□□□ -0.34
Efnb3O35393 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Efnb3O35393 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.93□□□□□ -0.34
Efnb3O35393 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.93□□□□□ -0.34
Efnb3O35393 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.93□□□□□ -0.34
Efnb3O35393 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Efnb3O35393 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.93□□□□□ -0.34
Efnb3O35393 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Efnb3O35393 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.92□□□□□ -0.34
Efnb3O35393 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.92□□□□□ -0.34
Efnb3O35393 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Efnb3O35393 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.92□□□□□ -0.34
Efnb3O35393 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Efnb3O35393 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Efnb3O35393 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Efnb3O35393 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Efnb3O35393 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Efnb3O35393 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Efnb3O35393 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Efnb3O35393 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Efnb3O35393 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Efnb3O35393 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms