Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm18284-201ENSMUST00000172604 624 ntBASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm26524-201ENSMUST00000192339 390 ntBASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm11927-201ENSMUST00000118472 759 ntBASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mir5133-201ENSMUST00000174955 77 ntBASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm10138-203ENSMUST00000206952 366 ntBASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms