Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC10.27□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igkv8-28A0A0G2JE47 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Igkv8-28A0A0G2JE47 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm6420-201ENSMUST00000193885 723 ntBASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm42569-201ENSMUST00000200539 472 ntBASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 AV356131-201ENSMUST00000206201 750 ntBASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 AC140264.2-202ENSMUST00000218746 817 ntBASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Igkv8-28A0A0G2JE47 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Mir2861-201ENSMUST00000175539 82 ntBASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ccdc166-201ENSMUST00000182172 2584 ntBASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Asic1-205ENSMUST00000228185 1818 ntBASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igkv8-28A0A0G2JE47 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm18284-201ENSMUST00000172604 624 ntBASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms