Protein–RNA interactions for Protein: A0A0B4J1I0

Igkv1-110, Immunoglobulin kappa variable 1-110 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-110A0A0B4J1I0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC10.58□□□□□ -0.71
Igkv1-110A0A0B4J1I0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Gm8839-201ENSMUST00000121279 1645 ntBASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Gm12527-201ENSMUST00000117967 564 ntBASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv1-110A0A0B4J1I0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.56□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Igkv1-110A0A0B4J1I0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv1-110A0A0B4J1I0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms