Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav6-4A0A075B6B4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-4A0A075B6B4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav6-4A0A075B6B4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-4A0A075B6B4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Gm6623-201ENSMUST00000173570 544 ntBASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-4A0A075B6B4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Mir770-201ENSMUST00000103252 94 ntBASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-4A0A075B6B4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms