Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-7A0A075B6B0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trav6d-7A0A075B6B0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6d-7A0A075B6B0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav6d-7A0A075B6B0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms