Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16A0A075B653 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav16A0A075B653 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Gm10849-201ENSMUST00000100397 618 ntBASIC12.66□□□□□ -0.38
Trav16A0A075B653 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Gm42569-201ENSMUST00000200539 472 ntBASIC12.66□□□□□ -0.38
Trav16A0A075B653 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.66□□□□□ -0.38
Trav16A0A075B653 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav16A0A075B653 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.65□□□□□ -0.38
Trav16A0A075B653 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms