Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 RNU4-18P-201ENST00000516751 149 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 EIF4EP5-201ENST00000528228 640 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 CKS1BP1-201ENST00000555221 240 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC025884.1-201ENST00000556034 378 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC007225.2-201ENST00000562529 256 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC024614.2-201ENST00000577584 372 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 LRRC37A5P-203ENST00000580181 585 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC010928.2-201ENST00000588017 287 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC009831.4-201ENST00000620744 325 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 MIR6813-201ENST00000621638 56 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC093591.3-201ENST00000634516 308 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC012442.3-202ENST00000636742 206 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC009093.8-201ENST00000641769 292 ntBASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
LINC01558Q9Y6Z2 AC008432.1-201ENST00000615912 1320 ntBASIC1.09□□□□□ -2.24
LINC01558Q9Y6Z2 AC080128.1-201ENST00000474389 1917 ntBASIC1.09□□□□□ -2.24
LINC01558Q9Y6Z2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 RNU6-821P-201ENST00000390995 107 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 CYCSP45-201ENST00000402289 315 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC096664.2-201ENST00000411843 406 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 GTF2IP20-201ENST00000431663 360 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 CBWD4P-201ENST00000445695 655 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AL500527.1-201ENST00000448532 255 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 Z82190.1-201ENST00000454534 490 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 RPS29P33-201ENST00000456717 146 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC068781.1-201ENST00000488231 618 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC055855.1-201ENST00000489563 579 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC034222.1-201ENST00000494052 532 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 RN7SL612P-201ENST00000497704 295 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC104685.1-201ENST00000502445 371 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC090568.1-201ENST00000509499 856 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 RNA5SP34-201ENST00000516887 130 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 SETP7-201ENST00000552169 453 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 CYCSP2-201ENST00000558168 301 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 MIR4299-201ENST00000577899 72 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 MIR5685-201ENST00000579080 79 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AC005972.3-201ENST00000606304 481 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 AL353748.2-201ENST00000622148 471 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 MIR1291-201ENST00000627649 87 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 MTND2P41-201ENST00000637599 773 ntBASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.08□□□□□ -2.24
LINC01558Q9Y6Z2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 RNU6-98P-201ENST00000384173 107 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 MIR218-2-201ENST00000385006 110 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 RNU6-1197P-201ENST00000391183 107 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AL356057.3-201ENST00000402607 340 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AL590762.4-201ENST00000425885 253 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 MTCO1P39-201ENST00000426148 480 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AL353689.1-201ENST00000438895 199 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AC124916.1-201ENST00000444020 547 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 MTND2P19-201ENST00000449129 1012 ntBASIC1.07□□□□□ -2.24
LINC01558Q9Y6Z2 RPL23AP15-201ENST00000450202 459 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms