Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 Y_RNA.405-201ENST00000383979 100 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.451-201ENST00000384200 100 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.524-201ENST00000384564 100 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.561-201ENST00000384694 100 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 RPS15AP40-201ENST00000419621 391 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 PNKDP1-201ENST00000435914 430 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC097463.1-201ENST00000447288 481 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 SRI-210ENST00000490437 570 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 FTH1P24-201ENST00000503502 462 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 SNORA31.3-201ENST00000516029 96 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.719-201ENST00000517156 106 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC009120.3-201ENST00000563335 499 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC104581.2-201ENST00000572227 430 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 MIR6862-1-201ENST00000613016 70 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 MIR6862-2-201ENST00000614755 70 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC116667.2-201ENST00000641075 823 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC079753.1-201ENST00000623243 3868 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC000374.1-201ENST00000434698 1745 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC123769.1-201ENST00000530992 3192 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AL078621.3-201ENST00000623707 2042 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 RNU6-1298P-201ENST00000362456 101 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.43-201ENST00000362670 111 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.308-201ENST00000365043 101 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 RNU6-449P-201ENST00000383914 107 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 RN7SKP151-201ENST00000410230 316 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.623-201ENST00000411128 95 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 TRAPPC2P4-201ENST00000421750 331 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 RPS29P14-201ENST00000431518 171 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC007998.1-201ENST00000474156 672 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 HMGN1P11-201ENST00000508668 303 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC010343.2-201ENST00000510162 224 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 RN7SKP258-201ENST00000517151 304 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 MRPS21P8-201ENST00000569196 235 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 SNORD113-5-201ENST00000607261 78 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 AL034546.1-201ENST00000623740 3693 ntBASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDHB3Q9Y5E6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 GUCY1B2-204ENST00000531898 1979 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 SAGE4P-201ENST00000442271 3381 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC007685.1-201ENST00000329806 452 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 SNORA25.1-201ENST00000362326 128 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.569-201ENST00000384749 103 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms