Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC087373.1-201ENST00000524920 491 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AP003102.1-201ENST00000525638 661 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 PSMA2P1-201ENST00000526365 646 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AP000857.1-201ENST00000532151 543 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC044913.1-201ENST00000557200 430 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC090695.1-201ENST00000561269 1222 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 NUTF2P8-201ENST00000604593 363 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AP003973.1-201ENST00000604639 691 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC124312.4-201ENST00000605533 310 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SMC3Q9UQE7 ASNSP3-201ENST00000451989 1306 ntBASIC3.36□□□□□ -1.87
SMC3Q9UQE7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 SNORA71.3-201ENST00000362582 128 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 RPS4XP3-201ENST00000398541 413 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AL133264.1-201ENST00000407157 562 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 HMGN2P35-201ENST00000412164 270 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 BX682237.1-201ENST00000415016 335 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 PTP4A1P7-201ENST00000423476 514 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC069306.1-201ENST00000507006 843 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC008837.1-201ENST00000511513 412 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC107016.2-201ENST00000547968 190 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC020895.1-201ENST00000595362 272 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC009269.6-201ENST00000621778 588 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC073348.1-201ENST00000623002 331 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 AC109454.4-201ENST00000623411 649 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 MFSD8-245ENST00000641743 948 ntBASIC3.35□□□□□ -1.87
SMC3Q9UQE7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMC3Q9UQE7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 HMGB1P5-201ENST00000255320 642 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AL024474.1-201ENST00000404655 591 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 BTF3P8-201ENST00000414577 526 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC092447.6-201ENST00000414578 210 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC241584.1-201ENST00000438469 1241 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 MRPL42P4-201ENST00000453267 443 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 RPL23AP31-201ENST00000456160 467 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 RPL23AP11-201ENST00000475260 469 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC008427.1-201ENST00000503102 655 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC093767.1-201ENST00000504523 156 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AP001804.3-201ENST00000525146 880 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 OR10V3P-201ENST00000525712 725 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 SULT1C2P1-202ENST00000562418 459 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 MIR1254-2-201ENST00000579553 63 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 BNIP3P33-201ENST00000598912 569 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC055876.5-201ENST00000605667 259 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC069234.5-201ENST00000611056 416 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC084824.4-201ENST00000620106 731 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AL138955.1-201ENST00000622881 1040 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 AC126544.2-201ENST00000625174 749 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 OR8B1P-202ENST00000641132 1178 ntBASIC3.34□□□□□ -1.87
SMC3Q9UQE7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.34□□□□□ -1.88
SMC3Q9UQE7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.34□□□□□ -1.88
SMC3Q9UQE7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SMC3Q9UQE7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SMC3Q9UQE7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AC092593.1-201ENST00000515413 1815 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 SNORA38.1-201ENST00000364172 131 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 SNORA51.6-201ENST00000384151 125 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms