Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SNORD88.1-201ENST00000408684 91 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AL133384.1-201ENST00000412744 351 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 RPS7P9-201ENST00000414704 586 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 MTND4P3-201ENST00000417829 541 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC027644.1-201ENST00000419595 298 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC009237.2-201ENST00000421358 284 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC241584.1-201ENST00000438469 1241 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AP000936.2-201ENST00000447151 681 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 MRPL42P4-201ENST00000453267 443 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC114781.4-201ENST00000513707 639 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC243972.3-201ENST00000539655 198 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 OR4T1P-201ENST00000554933 911 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 MTCYBP27-201ENST00000555160 670 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AP005137.2-201ENST00000609238 400 ntBASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
NPC1L1Q9UHC9 AC117529.2-201ENST00000512159 2068 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AP001148.1-201ENST00000624124 2359 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 RNU6-582P-201ENST00000362989 107 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 SNORA51.2-201ENST00000364595 132 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 SNORD116-23-201ENST00000384645 92 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 MIR607-201ENST00000385241 96 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AL121972.1-201ENST00000402023 252 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AL138880.1-201ENST00000405824 642 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AL355143.1-201ENST00000407101 841 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AC092393.1-201ENST00000439625 742 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 MTCYBP42-201ENST00000444653 1130 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 MRPL50P4-201ENST00000446432 475 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AC010301.1-201ENST00000473936 355 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 VPS26AP1-201ENST00000483197 979 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 MTCO3P15-201ENST00000526563 574 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 DEFB130C-202ENST00000530001 230 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AC007536.1-201ENST00000533382 349 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 MIR3908-201ENST00000579798 126 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 GAS5-AS1-201ENST00000602767 694 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AC073387.2-201ENST00000604797 784 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AL583856.2-201ENST00000606298 543 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 AL592148.2-201ENST00000612210 372 ntBASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPC1L1Q9UHC9 MTND4P9-201ENST00000507819 1346 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 RNU6-1066P-201ENST00000363573 105 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 RNU6-298P-201ENST00000390888 96 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 Y_RNA.578-201ENST00000390903 88 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AL512633.1-201ENST00000399931 655 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 MTCO1P56-201ENST00000401674 224 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AL023807.1-201ENST00000407932 359 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 MTND2P16-201ENST00000419987 799 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 RPL23AP16-201ENST00000441715 421 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC004022.1-201ENST00000447766 1066 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AL034418.1-201ENST00000448675 860 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 TRBV26-201ENST00000456572 344 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC091179.1-201ENST00000461606 579 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC079203.1-201ENST00000487972 404 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 KLRA1P-201ENST00000503499 986 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC019227.1-201ENST00000526902 510 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 ZNF705CP-201ENST00000530515 889 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AP001317.1-201ENST00000531194 960 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 YWHAZP1-201ENST00000556286 722 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC097504.2-201ENST00000608088 454 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC231759.1-201ENST00000616455 597 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 AC026634.1-201ENST00000634369 198 ntBASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPC1L1Q9UHC9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.59□□□□□ -1.83
NPC1L1Q9UHC9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPC1L1Q9UHC9 SNORA7.2-201ENST00000364446 145 ntBASIC3.59□□□□□ -1.83
NPC1L1Q9UHC9 MT-TC-201ENST00000387405 66 ntBASIC3.59□□□□□ -1.83
NPC1L1Q9UHC9 AL133264.1-201ENST00000407157 562 ntBASIC3.59□□□□□ -1.83
NPC1L1Q9UHC9 OFD1P18Y-201ENST00000420889 959 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms