Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNA5SP44-201ENST00000410446 133 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 RN7SKP167-201ENST00000411047 285 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AL109913.1-201ENST00000421173 514 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 COX6CP15-201ENST00000426313 211 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AL589872.1-201ENST00000426602 288 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC017083.1-201ENST00000428093 483 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 BTF3P10-201ENST00000433415 495 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 ARPC3P1-201ENST00000437218 533 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AL662791.1-201ENST00000441992 928 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 MTND3P10-201ENST00000450967 341 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 MTND2P24-201ENST00000453434 806 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC087312.1-201ENST00000471411 480 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 MIR2114-201ENST00000516645 80 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 FAM92A1P1-201ENST00000528023 890 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC006064.5-201ENST00000541782 248 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 MIR4504-201ENST00000577413 92 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC020914.4-201ENST00000597690 277 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC008277.2-201ENST00000605196 797 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AL445363.3-201ENST00000623080 671 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC006065.5-201ENST00000623427 349 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC016588.2-201ENST00000632484 3021 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 AC097714.1-201ENST00000511272 1647 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 ZNF33CP-201ENST00000432492 2030 ntBASIC4.31□□□□□ -1.72
DKK3Q9UBP4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
DKK3Q9UBP4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC027290.2-201ENST00000623210 18662 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 LARP1BP1-201ENST00000506036 1359 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC092447.10-201ENST00000620607 1652 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RNU6-744P-201ENST00000365557 107 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RNU6-730P-201ENST00000383954 104 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RNU6-1316P-201ENST00000384242 108 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 Y_RNA.573-201ENST00000384763 105 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RNU6-328P-201ENST00000390887 106 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RNA5SP171-201ENST00000391071 115 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RNU2-8P-201ENST00000410727 190 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 MTND3P17-201ENST00000416968 344 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RPL36AP36-201ENST00000418616 301 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RBMY1KP-201ENST00000423480 476 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 USP9YP36-201ENST00000424581 829 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AL358934.1-201ENST00000432346 324 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 MTND4P25-201ENST00000441039 533 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 FAM103A2P-201ENST00000444122 354 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 NFU1P2-201ENST00000448700 469 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC104073.1-201ENST00000451988 151 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 MTCO3P20-201ENST00000454926 688 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RBM43P1-201ENST00000476891 1081 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC092451.1-201ENST00000480211 153 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RPS3AP14-201ENST00000483907 780 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 HMGB1P36-201ENST00000487709 576 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AP001025.2-201ENST00000490908 477 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC117522.1-201ENST00000509821 380 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 PPBPP1-201ENST00000510807 373 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC093677.1-201ENST00000514414 678 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC099522.1-202ENST00000514718 367 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 RN7SKP234-201ENST00000517173 224 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 MIR4719-201ENST00000585233 84 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AL161729.3-201ENST00000603533 673 ntBASIC4.3□□□□□ -1.72
DKK3Q9UBP4 AC011468.4-201ENST00000603942 409 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms