Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 AC107934.1-201ENST00000522215 217 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 CBX3P5-201ENST00000552017 521 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 AC012507.3-201ENST00000603556 477 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 AC011468.4-201ENST00000603942 409 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 AC007621.1-201ENST00000604544 437 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 AL031666.3-201ENST00000609320 1006 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 OR10AB1P-201ENST00000609613 938 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 AL356585.4-201ENST00000623078 1229 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 FER-210ENST00000628534 558 ntTSL 5 BASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 AC010149.2-201ENST00000637608 315 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 AL359893.1-201ENST00000447628 1580 ntBASIC4.09□□□□□ -1.75
SH3BP4Q9P0V3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.09□□□□□ -1.76
SH3BP4Q9P0V3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.76
SH3BP4Q9P0V3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
SH3BP4Q9P0V3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.09□□□□□ -1.76
SH3BP4Q9P0V3 AC011266.1-201ENST00000624119 3569 ntBASIC4.09□□□□□ -1.76
SH3BP4Q9P0V3 AC092125.1-201ENST00000562568 1995 ntBASIC4.09□□□□□ -1.76
SH3BP4Q9P0V3 OR56B2P-202ENST00000641377 2453 ntBASIC4.09□□□□□ -1.76
SH3BP4Q9P0V3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 OR5P1P-201ENST00000299512 925 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC079741.1-201ENST00000321498 212 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RN7SKP44-201ENST00000363602 316 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RNU4-76P-201ENST00000364509 141 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RNU6-877P-201ENST00000383868 107 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 MIR3074-201ENST00000384885 81 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RNU6-1009P-201ENST00000390996 107 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RPL31P1-201ENST00000398116 372 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RPS4XP8-201ENST00000402039 771 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RNA5SP39-201ENST00000411245 120 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC127391.1-201ENST00000411737 98 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC016769.2-201ENST00000414815 475 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 ZNF90P2-204ENST00000419323 1075 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC092832.1-201ENST00000422934 400 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC019097.1-201ENST00000424783 735 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AL590233.1-201ENST00000430017 456 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC114755.5-201ENST00000447760 831 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AL513533.1-201ENST00000453728 415 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RPL39P36-201ENST00000490784 156 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC018710.1-201ENST00000506509 158 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 TXNP6-201ENST00000510190 310 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC097714.1-201ENST00000511272 1647 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC005798.1-201ENST00000513715 387 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RN7SKP116-201ENST00000516902 319 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RN7SKP92-201ENST00000517266 244 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AP003072.2-201ENST00000527756 676 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 GLYCAM1-201ENST00000546596 285 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 SUB1P2-201ENST00000556401 297 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 RPL23AP92-201ENST00000603609 255 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AL354984.3-201ENST00000604803 325 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AL161734.1-201ENST00000609720 557 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC019193.2-201ENST00000610012 634 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AL133173.2-201ENST00000614270 90 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 uc_338.13-201ENST00000618243 179 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC010338.1-201ENST00000621823 717 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 AC016588.2-201ENST00000632484 3021 ntBASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SH3BP4Q9P0V3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 FRG1BP-201ENST00000278882 761 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AL161781.1-201ENST00000354277 403 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RNU6-451P-201ENST00000362921 107 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 RNY3P3-201ENST00000363816 102 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 Y_RNA.509-201ENST00000384506 99 ntBASIC4.07□□□□□ -1.76
SH3BP4Q9P0V3 AC068050.1-201ENST00000394891 380 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms