Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 U3.20-201ENST00000390909 217 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 MTCO1P17-201ENST00000411522 491 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 PIGPP2-201ENST00000411569 458 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 TMEM167AP1-201ENST00000423409 219 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 C4BPAP2-201ENST00000428434 478 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AL590383.1-201ENST00000428602 75 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC090774.1-201ENST00000435925 246 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 THAP5P1-201ENST00000439089 262 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 RPS11P1-201ENST00000451072 473 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 RPS3AP6-201ENST00000484430 795 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC147055.4-201ENST00000504399 745 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC118282.1-201ENST00000506408 765 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC108475.1-201ENST00000507880 950 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC087369.1-201ENST00000520775 996 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AP003497.1-201ENST00000528472 562 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC011260.1-201ENST00000578420 472 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 AC004696.1-201ENST00000614345 607 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 PCMTD1P7-201ENST00000634506 357 ntBASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.41□□□□□ -1.86
CHCHD3Q9NX63 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHCHD3Q9NX63 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHCHD3Q9NX63 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL672167.1-206ENST00000356293 943 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 RNU6-223P-201ENST00000362830 107 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 RNU6-723P-201ENST00000383973 107 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 Y_RNA.625-201ENST00000411256 107 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 BMS1P22-201ENST00000414726 313 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL022400.1-201ENST00000423946 935 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 MTCO2P17-201ENST00000424336 677 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC234781.2-201ENST00000426370 994 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC009220.1-201ENST00000451614 275 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC099563.1-201ENST00000456086 418 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC011276.1-201ENST00000469688 323 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 RN7SL459P-201ENST00000481078 302 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 FCF1P3-201ENST00000496394 590 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC020893.1-201ENST00000502452 580 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 HSPD1P15-201ENST00000505573 1122 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC111000.2-201ENST00000507775 550 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 SNORA3.4-201ENST00000515969 96 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 RNA5SP164-201ENST00000516533 110 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC006960.3-201ENST00000561845 705 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC106900.2-201ENST00000604994 317 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AL450472.3-201ENST00000615578 367 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC009464.1-201ENST00000615731 469 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC006111.3-201ENST00000622137 383 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AP003122.6-201ENST00000623831 495 ntBASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.4□□□□□ -1.87
CHCHD3Q9NX63 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHCHD3Q9NX63 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms