Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AC079597.1-201ENST00000624306 508 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HPF1Q9NWY4 AL049781.1-201ENST00000623195 3585 ntBASIC3.19□□□□□ -1.9
HPF1Q9NWY4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 MTND5P1-201ENST00000445440 1375 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 MIR208A-201ENST00000362287 71 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 SNORA70.4-201ENST00000365509 134 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 OR4K6P-201ENST00000416478 897 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AL353678.1-201ENST00000422735 741 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AL139421.1-201ENST00000423010 169 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC012498.1-201ENST00000424037 437 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AP000907.1-201ENST00000428428 510 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 RPL23AP69-201ENST00000431134 458 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AL512844.2-201ENST00000433990 593 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 UBBP3-201ENST00000445497 241 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC125238.1-201ENST00000448842 249 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 MTND2P24-201ENST00000453434 806 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 snoU13.8-201ENST00000458890 104 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC010401.1-201ENST00000463867 348 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC093663.1-201ENST00000497190 394 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 SETP14-201ENST00000497538 873 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 FCF1P8-201ENST00000510322 597 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 DUXAP6-201ENST00000553858 601 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AADACP1-206ENST00000561502 1193 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 VN1R78P-201ENST00000597393 564 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC009237.15-201ENST00000610252 501 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC004852.3-201ENST00000614131 326 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC090132.2-201ENST00000615881 347 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 OR1S1-201ENST00000624470 978 ntBASIC3.18□□□□□ -1.9
HPF1Q9NWY4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HPF1Q9NWY4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 SDAD1P2-201ENST00000441308 2028 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC008669.1-201ENST00000565823 2178 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 RNU1-105P-201ENST00000363470 161 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 RNU1-33P-201ENST00000364249 162 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 SNORD56.5-201ENST00000364281 72 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 RNVU1-14-201ENST00000384770 164 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 HSFY4P-201ENST00000415994 1181 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 Z75741.2-201ENST00000417272 1167 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 ARPC3P5-201ENST00000448802 534 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AL358832.1-201ENST00000497800 389 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC093677.1-201ENST00000514414 678 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 RNU6-583P-201ENST00000516012 92 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 RNU6-928P-201ENST00000516876 104 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 SNORA31.22-201ENST00000517204 135 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 OR5AP1P-201ENST00000529730 940 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC124947.2-202ENST00000552735 133 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC010620.2-201ENST00000600135 313 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC013553.2-201ENST00000604244 589 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AC007179.3-201ENST00000604976 235 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 AL159972.1-201ENST00000625150 448 ntBASIC3.17□□□□□ -1.9
HPF1Q9NWY4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HPF1Q9NWY4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 AC073073.2-201ENST00000609827 2578 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 RNA5SP387-201ENST00000364226 106 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 RNU6-283P-201ENST00000364788 107 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 MIR514A1-201ENST00000385133 98 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 SNORA40.4-201ENST00000390971 128 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 RNA5SP354-201ENST00000391247 136 ntBASIC3.16□□□□□ -1.9
HPF1Q9NWY4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HPF1Q9NWY4 RSL24D1P1-201ENST00000404972 493 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms