Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 RPL23AP74-201ENST00000437246 471 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 RPS24P13-201ENST00000442520 397 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 PABPC1P3-201ENST00000469174 459 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AC093767.1-201ENST00000504523 156 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AC118282.2-201ENST00000508739 374 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AC098799.2-201ENST00000509466 868 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AP000790.1-201ENST00000528891 737 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AC128657.1-201ENST00000549459 145 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 GTF2IP8-201ENST00000560687 584 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AP005205.1-201ENST00000563503 508 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 MTCO3P13-201ENST00000577757 781 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
TREX1Q9NSU2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.67□□□□□ -1.98
TREX1Q9NSU2 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AL672167.1-206ENST00000356293 943 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 RNU6-353P-201ENST00000364266 108 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 RNU6-619P-201ENST00000365146 108 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 MIR491-201ENST00000384877 84 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 RNA5SP252-201ENST00000391131 119 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AL360182.1-201ENST00000397433 468 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AL356057.3-201ENST00000402607 340 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 LSM1P1-201ENST00000438629 273 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC107083.1-201ENST00000439643 279 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 MTCO3P2-201ENST00000457365 171 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 RPL32P14-201ENST00000463196 378 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC008379.1-201ENST00000463655 464 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 VPS26AP1-201ENST00000483197 979 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC096751.1-202ENST00000502691 1067 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AIG1P1-201ENST00000503376 148 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC027338.1-201ENST00000514840 825 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 RNA5SP367-201ENST00000516557 118 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 ELOCP31-201ENST00000540463 467 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC018630.1-201ENST00000541376 925 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AP002906.1-201ENST00000603405 233 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC002487.1-201ENST00000604565 994 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AL160281.1-201ENST00000605307 311 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC009318.4-201ENST00000620496 486 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TREX1Q9NSU2 AC026241.1-201ENST00000517873 2142 ntBASIC2.66□□□□□ -1.98
TREX1Q9NSU2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.98
TREX1Q9NSU2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
TREX1Q9NSU2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 RNU6-582P-201ENST00000362989 107 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 RNU5D-1-201ENST00000363299 116 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 RNU1-100P-201ENST00000365255 165 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 RNU6-932P-201ENST00000391108 106 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AL139098.1-201ENST00000407291 389 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AL133384.1-201ENST00000412744 351 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC099677.1-201ENST00000420575 175 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC005345.1-201ENST00000431868 217 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 CACYBPP2-201ENST00000453625 678 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC084024.2-201ENST00000503480 791 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 RNU6-885P-201ENST00000516607 104 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC100870.1-201ENST00000522035 505 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC006518.2-201ENST00000542513 940 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC123904.3-201ENST00000547218 814 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC124283.4-201ENST00000581815 456 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AL451007.1-201ENST00000595491 289 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 AC106028.5-201ENST00000610332 395 ntBASIC2.65□□□□□ -1.99
TREX1Q9NSU2 VN1R74P-201ENST00000613259 503 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms