Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC023424.2-201ENST00000493479 777 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 CASP1P1-201ENST00000526345 212 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 OR7K1P-201ENST00000546439 926 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 MIR3609-201ENST00000582661 80 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 DUXAP4-201ENST00000603046 613 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC079089.3-201ENST00000603094 673 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC120053.1-201ENST00000607706 736 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC109454.4-201ENST00000623411 649 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AC090617.7-201ENST00000623952 126 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 AP003122.5-201ENST00000527668 3766 ntBASIC3.03□□□□□ -1.92
LRRC40Q9H9A6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 GABRG2-229ENST00000641017 3628 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 RNA5SP139-201ENST00000364340 117 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 SNORD65.1-201ENST00000390889 71 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AL356131.1-201ENST00000405826 414 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 BMS1P22-201ENST00000414726 313 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 MTCO1P3-201ENST00000429327 192 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 MTND2P5-201ENST00000432656 1006 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 MTCYBP11-201ENST00000447254 1109 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 RPL39P6-201ENST00000448289 150 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC005297.2-201ENST00000450430 606 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 OFD1P3Y-201ENST00000453312 783 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 RPS29P2-201ENST00000479278 136 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AP004217.1-201ENST00000480579 346 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 DSTNP2-201ENST00000504533 515 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 NAMPTP2-201ENST00000505629 1115 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC113420.1-201ENST00000507903 571 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC008837.1-201ENST00000511513 412 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 SNORA26.10-201ENST00000516427 141 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 RNU6-56P-201ENST00000516986 93 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC104986.1-201ENST00000517978 436 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC125611.1-201ENST00000549563 229 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 MIR3921-201ENST00000577308 85 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 DUXAP11-201ENST00000603858 526 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 YPEL5P2-201ENST00000605553 359 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC069200.1-201ENST00000609511 323 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 DUXAP10-204ENST00000612052 616 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC244100.1-202ENST00000621554 382 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC011330.2-201ENST00000621680 635 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 MKKS-204ENST00000639674 192 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 AC087359.1-201ENST00000508335 1740 ntBASIC3.02□□□□□ -1.93
LRRC40Q9H9A6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 SNORA63.3-201ENST00000362682 132 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 RNU6-236P-201ENST00000363886 106 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 SNORA71.1-201ENST00000364523 117 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AL645937.1-202ENST00000421799 937 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 SAR1AP4-201ENST00000429225 591 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AL590233.1-201ENST00000430017 456 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 THAP5P1-201ENST00000439089 262 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC112492.1-201ENST00000449607 712 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 RPL21P41-201ENST00000459863 264 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC026410.2-201ENST00000460281 156 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 OR2A20P-203ENST00000498397 1268 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 RAC1P5-201ENST00000512182 576 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC008885.1-201ENST00000514930 301 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC087894.1-201ENST00000538359 518 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 AC023825.1-201ENST00000566704 1030 ntBASIC3.01□□□□□ -1.93
LRRC40Q9H9A6 MIR5708-201ENST00000579723 85 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms