Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS11Q9H270 LINC00622-201ENST00000562811 1570 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 SAMMSON-226ENST00000642089 1582 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS11Q9H270 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AL442639.1-201ENST00000625030 1899 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS11Q9H270 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS11Q9H270 MTND5P33-201ENST00000571250 1450 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS11Q9H270 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS11Q9H270 GNG5P1-201ENST00000255500 204 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 RN7SKP115-201ENST00000363177 317 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 Y_RNA.193-201ENST00000363979 102 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
VPS11Q9H270 SNORA22B-201ENST00000383876 138 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 SNORA69-201ENST00000383895 132 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 Y_RNA.493-201ENST00000384422 102 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS11Q9H270 U3.29-201ENST00000391296 212 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 AL031679.1-201ENST00000400616 525 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 AL603908.1-201ENST00000406098 201 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 RNU2-47P-201ENST00000410649 186 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 MTND3P8-201ENST00000412909 339 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 AL355433.1-201ENST00000422804 300 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS11Q9H270 PSMA6P3-201ENST00000428242 164 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS11Q9H270 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS11Q9H270 HMGB1P18-201ENST00000438801 619 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS11Q9H270 ARL2BPP10-201ENST00000446487 531 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS11Q9H270 MTND4P17-201ENST00000470444 350 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 RPL31P50-201ENST00000471002 296 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 AC027575.1-201ENST00000481064 460 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AC006390.1-201ENST00000508068 283 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AC005741.1-201ENST00000511094 432 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS11Q9H270 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS11Q9H270 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS11Q9H270 SUB1P2-201ENST00000556401 297 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 AC091178.1-203ENST00000584586 279 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS11Q9H270 BCRP9-201ENST00000605312 388 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 AL355472.4-201ENST00000610233 626 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 AL121612.2-201ENST00000612261 482 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 SNX18P1Y-201ENST00000616231 511 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS11Q9H270 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS11Q9H270 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS11Q9H270 AC090337.1-201ENST00000579651 2074 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS11Q9H270 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS11Q9H270 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS11Q9H270 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS11Q9H270 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS11Q9H270 AC087190.4-201ENST00000574616 8334 ntBASIC4.64□□□□□ -1.67
VPS11Q9H270 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS11Q9H270 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS11Q9H270 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS11Q9H270 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS11Q9H270 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
VPS11Q9H270 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VPS11Q9H270 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS11Q9H270 RNU6-777P-201ENST00000364265 104 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 Y_RNA.231-201ENST00000364358 102 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 RNA5SP22-201ENST00000365393 109 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 RNA5SP151-201ENST00000365632 117 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 Y_RNA.384-201ENST00000383909 102 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 Y_RNA.387-201ENST00000383918 102 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 Y_RNA.452-201ENST00000384202 108 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 RNU6-952P-201ENST00000391164 108 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 RPS4XP8-201ENST00000402039 771 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS11Q9H270 DPPA2P3-201ENST00000411853 655 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 AL591848.1-201ENST00000413092 322 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 AC006548.1-201ENST00000427470 102 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 AL606489.2-201ENST00000433886 234 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS11Q9H270 AC011753.3-201ENST00000443436 406 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 AC005297.2-201ENST00000450430 606 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 MTCO1P42-201ENST00000457379 726 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 snoU13.3-201ENST00000459441 104 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 RN7SL283P-201ENST00000489055 303 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS11Q9H270 AC008953.1-201ENST00000497334 318 ntBASIC4.63□□□□□ -1.67
VPS11Q9H270 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS11Q9H270 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS11Q9H270 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS11Q9H270 PPBPP1-201ENST00000510807 373 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms