Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 AC233263.6-201ENST00000631132 1963 ntBASIC3.11□□□□□ -1.91
POLR1EQ9GZS1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC004972.1-201ENST00000623934 2209 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 MIR22-201ENST00000362190 85 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 RNU6-799P-201ENST00000363567 107 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 Y_RNA.578-201ENST00000390903 88 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 RNA5SP274-201ENST00000410484 108 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 OR2AS1P-201ENST00000427827 319 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC079776.3-201ENST00000450665 370 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 RPS15AP17-201ENST00000470598 390 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC114967.1-201ENST00000504890 259 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AL359273.1-201ENST00000510918 627 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 MAGOH2P-202ENST00000584384 429 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AL390838.2-201ENST00000602394 274 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC010975.3-201ENST00000618727 978 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AP003476.1-201ENST00000623984 516 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
POLR1EQ9GZS1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC008568.2-201ENST00000623862 2313 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 DEFB108F-201ENST00000344638 222 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 RNA5SP374-201ENST00000362939 125 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 MIR135A2-201ENST00000384854 100 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 MTATP6P27-201ENST00000416987 621 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 PTP4A1P7-201ENST00000423476 514 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 THAP5P1-201ENST00000439089 262 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC005297.2-201ENST00000450430 606 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC245166.1-201ENST00000521012 253 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 DEFB108D-201ENST00000527787 222 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC010653.1-201ENST00000571108 881 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 OR4K8P-201ENST00000578842 1048 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 DNAJC19P3-201ENST00000594491 331 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 DUXAP11-201ENST00000603858 526 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AL442067.2-201ENST00000614033 363 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 MIR8057-201ENST00000620957 69 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC010872.1-201ENST00000624225 675 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 AC107982.1-201ENST00000507171 1300 ntBASIC3.09□□□□□ -1.91
POLR1EQ9GZS1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
POLR1EQ9GZS1 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.92
POLR1EQ9GZS1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC073325.2-201ENST00000339545 159 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 RNU6-298P-201ENST00000390888 96 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 MIR887-201ENST00000401258 79 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AL356131.1-201ENST00000405826 414 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 SDCBPP3-201ENST00000419629 891 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC006946.1-201ENST00000429106 328 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AL590233.1-201ENST00000430017 456 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 FTH1P1-201ENST00000437933 532 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC112492.1-201ENST00000449607 712 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 RPS29P12-201ENST00000460178 152 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AP001992.1-205ENST00000462248 379 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AL049714.1-201ENST00000466686 347 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms