Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RNU4-27P-201ENST00000410889 139 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AL356320.2-201ENST00000417263 507 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC005345.1-201ENST00000431868 217 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX6-2Q9C056 DPPA3P1-201ENST00000448050 469 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC048346.1-201ENST00000510247 144 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.07□□□□□ -2.08
NKX6-2Q9C056 SNORA76.2-201ENST00000517095 137 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC100870.1-201ENST00000522035 505 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC087272.1-201ENST00000523624 533 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX6-2Q9C056 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NKX6-2Q9C056 MTCO1P40-201ENST00000574371 625 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC245389.1-201ENST00000605141 529 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC012443.1-201ENST00000605605 231 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC245517.5-201ENST00000611529 162 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 MIR6840-201ENST00000611937 71 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC068724.3-201ENST00000625906 87 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 AC008432.1-201ENST00000615912 1320 ntBASIC2.07□□□□□ -2.08
NKX6-2Q9C056 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.07□□□□□ -2.08
NKX6-2Q9C056 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 SNORA56-201ENST00000383966 129 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 MIR554-201ENST00000384874 96 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 TAS2R15P-201ENST00000390674 928 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AL136372.1-201ENST00000403060 228 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AL162578.1-201ENST00000406202 378 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AL133384.1-201ENST00000412744 351 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 FCF1P2-201ENST00000415284 583 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC092573.2-201ENST00000434546 243 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC234064.1-201ENST00000436312 247 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC009220.1-201ENST00000451614 275 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 snoU109.4-201ENST00000458953 143 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC025181.1-201ENST00000477507 416 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 MRPL42P6-201ENST00000486397 371 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC091826.1-201ENST00000514065 313 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 RNU6-885P-201ENST00000516607 104 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 MTATP6P25-201ENST00000574491 261 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 MIR4635-201ENST00000583759 79 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC008739.2-201ENST00000597006 317 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC133794.1-201ENST00000602731 914 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC024153.1-201ENST00000603103 365 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AL590396.4-201ENST00000636779 956 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 AC080100.1-201ENST00000624239 5356 ntBASIC2.06□□□□□ -2.08
NKX6-2Q9C056 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
NKX6-2Q9C056 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 RNU6-1155P-201ENST00000363554 107 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 OR1L1-202ENST00000373686 1083 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 AL355615.1-201ENST00000406187 641 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 AC091286.1-201ENST00000431233 461 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 ELOCP3-201ENST00000439303 348 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 RAC1P7-201ENST00000445367 377 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 AL513328.1-201ENST00000446460 224 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 SETP11-201ENST00000473027 690 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX6-2Q9C056 AC010468.3-201ENST00000508225 458 ntBASIC2.05□□□□□ -2.08
NKX6-2Q9C056 AC008885.1-201ENST00000514930 301 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 300.9 ms