Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 RPL23AP81-201ENST00000455252 467 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 RN7SL98P-201ENST00000462271 300 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AL049714.1-201ENST00000466686 347 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC022616.3-201ENST00000523940 148 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 HIGD1AP5-201ENST00000529959 259 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC018630.1-201ENST00000541376 925 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC006064.5-201ENST00000541782 248 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC135001.1-201ENST00000544546 283 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AL109766.1-201ENST00000555080 552 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AL606834.2-201ENST00000602954 668 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC012507.3-201ENST00000603556 477 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AL139286.1-201ENST00000604465 483 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 MIR6130-201ENST00000619419 109 ntBASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM54Q9BYV2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 RNU6-754P-201ENST00000391166 107 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 CIR1P3-201ENST00000405137 479 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 MIR1179-201ENST00000408703 91 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC244098.2-201ENST00000422068 99 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 RPL23AP38-201ENST00000423801 469 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC003071.1-201ENST00000451219 789 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC013267.1-201ENST00000458227 267 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 RN7SL860P-201ENST00000473738 223 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC135721.1-201ENST00000497954 479 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC009646.1-201ENST00000510455 318 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 DEFB108D-201ENST00000527787 222 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 CCNG2P1-201ENST00000549521 1000 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AL133241.1-201ENST00000556832 487 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 MIR4715-201ENST00000584117 79 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC234771.5-201ENST00000600161 514 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC068790.5-201ENST00000602741 355 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC092954.2-201ENST00000609103 430 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC093838.1-201ENST00000613014 469 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 MIR7702-201ENST00000621931 59 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC019226.1-201ENST00000625666 515 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 AC068254.2-201ENST00000623938 3577 ntBASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
TRIM54Q9BYV2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AL365440.1-201ENST00000436135 2167 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 RNA5SP502-201ENST00000362694 119 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 Y_RNA.248-201ENST00000364501 109 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 MIR135A2-201ENST00000384854 100 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 CALM2P3-201ENST00000400429 449 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AL109755.1-201ENST00000401791 649 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AL139095.3-201ENST00000419672 1203 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC245028.1-201ENST00000423259 256 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 GPR143P-201ENST00000434155 205 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AC140076.1-201ENST00000449897 361 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 NANOGP10-201ENST00000453325 895 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 AL121877.1-201ENST00000453704 622 ntBASIC4.19□□□□□ -1.74
TRIM54Q9BYV2 RPL36AP13-201ENST00000457490 317 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms