Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RN7SL290P-201ENST00000578661 300 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC104695.3-201ENST00000604052 296 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC093799.2-201ENST00000610062 578 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AL049794.2-201ENST00000616301 365 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AL355365.1-201ENST00000616480 294 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC078938.1-201ENST00000620993 318 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AL357559.1-201ENST00000622228 274 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 AC025034.2-201ENST00000623264 286 ntBASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.27□□□□□ -1.73
SSBP3Q9BWW4 MTND5P27-201ENST00000428871 1720 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RNU6-562P-201ENST00000362731 107 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RNU6-511P-201ENST00000363496 107 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 Y_RNA.152-201ENST00000363578 100 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RNA5SP455-201ENST00000365190 119 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 SNORD115-7-201ENST00000365306 82 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 OR1L6-202ENST00000373684 1044 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 Y_RNA.428-201ENST00000384078 102 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 SNORA75.6-201ENST00000391318 127 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RNA5SP241-201ENST00000391326 114 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 NDUFS5P1-201ENST00000405668 289 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RN7SKP125-201ENST00000410481 302 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RNU4-46P-201ENST00000410818 138 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AL139095.3-201ENST00000419672 1203 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 COX6CP15-201ENST00000426313 211 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RPL36AP6-201ENST00000435770 321 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 KNOP1P3-201ENST00000446933 426 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AL162388.1-201ENST00000450912 352 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 PCNPP5-201ENST00000452246 481 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RNU7-59P-201ENST00000459101 61 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RN7SL443P-201ENST00000464331 290 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC116337.1-201ENST00000509680 687 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 HIGD1AP13-201ENST00000509878 289 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 RPS27AP18-201ENST00000515536 459 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC093853.1-201ENST00000515689 483 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 SNORD116.3-201ENST00000517176 78 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC022882.1-201ENST00000532142 501 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AL138726.1-201ENST00000614873 333 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC103705.1-201ENST00000619013 241 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 MIR6839-201ENST00000620425 113 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AL445363.3-201ENST00000623080 671 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AL353662.3-201ENST00000625131 237 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AC130650.2-201ENST00000618736 2403 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AP000542.2-201ENST00000623199 6179 ntBASIC4.26□□□□□ -1.73
SSBP3Q9BWW4 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 THAP12P5-201ENST00000405864 2275 ntBASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 SNORA66-201ENST00000384792 133 ntBASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSBP3Q9BWW4 Y_RNA.645-201ENST00000391229 102 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms