Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CBX3P4-201ENST00000538909 354 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 AL157871.3-201ENST00000557231 293 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 AC119403.2-201ENST00000590960 598 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 AC091193.1-201ENST00000604640 448 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 AC123912.5-201ENST00000605470 343 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 AC009318.2-201ENST00000610917 651 ntBASIC6.17□□□□□ -1.42
PHOX2BQ99453 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PHOX2BQ99453 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.17□□□□□ -1.42
PHOX2BQ99453 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PHOX2BQ99453 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PHOX2BQ99453 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 Y_RNA.33-201ENST00000362591 102 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 RNA5SP350-201ENST00000363298 111 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 RNU6-263P-201ENST00000363811 107 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 Y_RNA.581-201ENST00000391017 97 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 AL356981.1-201ENST00000454879 684 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 AL122020.1-201ENST00000472287 459 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 RN7SL326P-201ENST00000477493 296 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 RN7SL547P-201ENST00000490793 290 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 AC022206.1-201ENST00000495947 347 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 RNU1-86P-201ENST00000516108 154 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 RNU1-107P-201ENST00000516617 154 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 SNORA31.22-201ENST00000517204 135 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 AC109479.2-201ENST00000517842 174 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 AC022884.2-201ENST00000578535 580 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 SNORD84-203ENST00000584275 78 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 AC120057.5-201ENST00000623840 154 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 AC025470.1-201ENST00000510053 2032 ntBASIC6.16□□□□□ -1.42
PHOX2BQ99453 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PHOX2BQ99453 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PHOX2BQ99453 AC133552.1-201ENST00000569988 4007 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PHOX2BQ99453 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 UBE2L2-201ENST00000254302 429 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 MIR412-201ENST00000362142 91 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 SNORA70E-201ENST00000384492 135 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 RNU6-125P-201ENST00000384505 107 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 RNU6-178P-201ENST00000384631 104 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 MIR223-201ENST00000385204 110 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 RNA5SP251-201ENST00000410614 137 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AL713922.1-201ENST00000416477 747 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 TMEM167AP1-201ENST00000423409 219 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 HSPD1P21-201ENST00000436541 245 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 RPL12P46-201ENST00000436610 195 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AL390119.1-201ENST00000440329 312 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AL590399.6-201ENST00000446396 307 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 RN7SL172P-201ENST00000460535 303 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 AP000797.2-201ENST00000475768 606 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AC012158.1-204ENST00000483430 465 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 SEPT14P8-201ENST00000508026 178 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 RNU6-255P-201ENST00000516957 105 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 BNIP3P5-201ENST00000562290 498 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AC104581.2-201ENST00000572227 430 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 MIR4330-201ENST00000579077 105 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 AC010620.2-201ENST00000600135 313 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 Z83818.1-201ENST00000603584 150 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AL445647.2-201ENST00000615170 130 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 U2.14-201ENST00000615943 113 ntBASIC6.15□□□□□ -1.42
PHOX2BQ99453 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.15□□□□□ -1.42
PHOX2BQ99453 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC6.15□□□□□ -1.43
PHOX2BQ99453 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms