Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 RNU5A-1-201ENST00000362698 116 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 SNORD113.2-201ENST00000364166 89 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 SNORD115.1-201ENST00000391109 76 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 CCNG1P1-201ENST00000406783 885 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC078974.1-201ENST00000411597 223 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 RPL27AP8-201ENST00000424277 446 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AL353777.1-201ENST00000425552 326 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AL356583.2-201ENST00000426536 280 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC108059.3-201ENST00000456388 214 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 RPL7P15-201ENST00000461190 712 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC006463.2-201ENST00000473326 348 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC080014.1-201ENST00000496877 1201 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC135721.1-201ENST00000497954 479 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC093824.1-201ENST00000508796 343 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AL359273.1-201ENST00000510918 627 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC022878.1-201ENST00000530684 149 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC008011.1-201ENST00000545989 227 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 ZNF519P3-201ENST00000557158 1032 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC051619.2-201ENST00000559063 397 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 ZNF192P1-203ENST00000565888 810 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 MIR548AB-201ENST00000584917 84 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 BNIP3P8-201ENST00000597863 560 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC112191.3-201ENST00000604371 277 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC135507.1-201ENST00000607214 561 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC103710.1-201ENST00000610003 901 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC099778.2-201ENST00000610904 211 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC093838.1-201ENST00000613014 469 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC009159.1-201ENST00000618386 642 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AL603758.1-201ENST00000618654 241 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AC009878.1-201ENST00000621819 340 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 AL138713.1-201ENST00000624026 2130 ntBASIC3.69□□□□□ -1.82
NR1H4Q96RI1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NR1H4Q96RI1 RNU5E-8P-201ENST00000363502 116 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AL109755.1-201ENST00000401791 649 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 MIR1290-201ENST00000408735 78 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 Y_RNA.608-201ENST00000410647 95 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 RN7SKP142-201ENST00000411236 328 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 RPS7P13-201ENST00000413955 498 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AL157831.1-201ENST00000426134 473 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 FTH1P1-201ENST00000437933 532 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AC006466.1-201ENST00000438721 289 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AL049734.2-201ENST00000441066 616 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 HMGN2P16-201ENST00000456802 261 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 OR9M1P-201ENST00000459641 921 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 IGLVIV-65-201ENST00000517313 360 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AC022616.6-201ENST00000520479 119 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AC011602.1-201ENST00000546484 331 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 TGIF1P1-201ENST00000558095 802 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AL356432.3-201ENST00000568952 465 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 MIR3921-201ENST00000577308 85 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 AC012150.2-201ENST00000621300 544 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.68□□□□□ -1.82
NR1H4Q96RI1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.68□□□□□ -1.82
NR1H4Q96RI1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 SNORD35B-201ENST00000363660 87 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 RNU5A-8P-201ENST00000364102 114 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 SNORA70F-201ENST00000384142 135 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 MIR19A-201ENST00000384878 82 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms