Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC026634.1-201ENST00000634369 198 ntBASIC2.38□□□□□ -2.03
LINC00477Q96M19 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC00477Q96M19 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC00477Q96M19 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC00477Q96M19 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.38□□□□□ -2.03
LINC00477Q96M19 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LINC00477Q96M19 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00477Q96M19 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC099786.3-201ENST00000565735 1410 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00477Q96M19 Y_RNA.126-201ENST00000363382 111 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 RNU6-343P-201ENST00000364709 104 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00477Q96M19 RNU6-413P-201ENST00000384115 107 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 SNORA51.6-201ENST00000384151 125 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 SNORA1.3-201ENST00000384676 136 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 TAF9BP1-201ENST00000396646 746 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 SNRPEP2-201ENST00000397592 279 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 RNU4-78P-201ENST00000410940 126 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 RN7SKP58-201ENST00000411010 305 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 MRPS36P1-201ENST00000421291 307 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC093151.1-201ENST00000427711 313 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC018644.1-201ENST00000429934 551 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC005019.1-201ENST00000436455 431 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC241584.1-201ENST00000438469 1241 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 RPL21P2-201ENST00000440049 481 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 CR769776.1-201ENST00000441254 787 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 RPS29P12-201ENST00000460178 152 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 PLGLA-201ENST00000465668 449 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC108734.3-201ENST00000481241 1165 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 OR5H5P-201ENST00000503164 928 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 RN7SKP43-201ENST00000516173 320 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC104986.1-201ENST00000517978 436 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC007536.1-201ENST00000533382 349 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 OR8K4P-201ENST00000534608 872 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC011611.1-201ENST00000552179 197 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 NBEAP1-201ENST00000554452 979 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC128687.1-201ENST00000605304 619 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 uc_338.25-201ENST00000613756 156 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AL355810.1-201ENST00000614629 552 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 OR1S1-201ENST00000624470 978 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00477Q96M19 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LINC00477Q96M19 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.37□□□□□ -2.03
LINC00477Q96M19 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
LINC00477Q96M19 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00477Q96M19 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AL049781.1-201ENST00000623195 3585 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00477Q96M19 RNU4-92P-201ENST00000363783 136 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 SNORA51.4-201ENST00000364993 124 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 RPL23AP29-201ENST00000397284 453 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 HMGN2P30-201ENST00000423237 256 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC091286.1-201ENST00000431233 461 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 HMGN2P31-201ENST00000432430 273 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC091862.1-201ENST00000438016 1100 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 RPS12P18-201ENST00000442381 270 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 Z96811.1-201ENST00000445880 108 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 VN1R10P-201ENST00000447106 875 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 GAPDHP27-201ENST00000447427 1020 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AL590664.1-201ENST00000448065 339 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.36□□□□□ -2.03
LINC00477Q96M19 RPL21P134-201ENST00000453468 483 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 MTCO3P2-201ENST00000457365 171 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 AC092757.1-201ENST00000467293 467 ntBASIC2.36□□□□□ -2.03
LINC00477Q96M19 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms