Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SPG11Q96JI7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SPG11Q96JI7 RNA5SP257-201ENST00000363023 116 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 RNU1-138P-201ENST00000384093 164 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 HSPD1P16-201ENST00000402302 394 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 RNA5SP181-201ENST00000410246 98 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC008571.1-201ENST00000467232 300 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.62□□□□□ -2.15
SPG11Q96JI7 AL512598.1-201ENST00000610158 273 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SPG11Q96JI7 AC244517.1-201ENST00000606030 2086 ntBASIC1.62□□□□□ -2.15
SPG11Q96JI7 HMGB1P11-201ENST00000413899 637 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC073310.1-201ENST00000423226 1033 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 YWHAZP7-201ENST00000436906 631 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 GSTA11P-201ENST00000452866 669 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC011979.1-201ENST00000472300 483 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AF131216.2-201ENST00000512316 564 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC016957.1-201ENST00000534895 309 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 MIR3186-201ENST00000577404 85 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 MIR5089-201ENST00000580047 84 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC002487.1-201ENST00000604565 994 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC096772.1-201ENST00000609146 564 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC107294.3-201ENST00000609211 526 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SPG11Q96JI7 Y_RNA.471-201ENST00000384312 102 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 DNAJC19P6-201ENST00000401853 280 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 IPMKP1-201ENST00000425988 855 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC002553.2-201ENST00000453217 340 ntBASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SPG11Q96JI7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SPG11Q96JI7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SPG11Q96JI7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.6□□□□□ -2.15
SPG11Q96JI7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SPG11Q96JI7 Z98749.2-208ENST00000381646 500 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SPG11Q96JI7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
SPG11Q96JI7 AL513331.1-201ENST00000411908 397 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 HMGB1P31-201ENST00000437242 427 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 AP000705.1-201ENST00000454567 350 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 OR4G1P-201ENST00000588632 938 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.6□□□□□ -2.15
SPG11Q96JI7 OR10AB1P-201ENST00000609613 938 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SPG11Q96JI7 FTH1P12-201ENST00000432137 551 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.6□□□□□ -2.15
SPG11Q96JI7 RPL23AP44-201ENST00000482216 473 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 AL121821.2-201ENST00000556081 394 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 NIFKP8-201ENST00000560500 874 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 uc_338.5-201ENST00000611839 155 ntBASIC1.6□□□□□ -2.15
SPG11Q96JI7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SPG11Q96JI7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
SPG11Q96JI7 MIR96-201ENST00000362288 78 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.59□□□□□ -2.15
SPG11Q96JI7 USP9YP8-201ENST00000441913 500 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 RPS29P1-201ENST00000465274 159 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.59□□□□□ -2.15
SPG11Q96JI7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.59□□□□□ -2.15
SPG11Q96JI7 RNA5SP395-201ENST00000516567 118 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 AC019176.1-201ENST00000518519 225 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.59□□□□□ -2.15
SPG11Q96JI7 IGHV3-76-201ENST00000522465 295 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.59□□□□□ -2.15
SPG11Q96JI7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SPG11Q96JI7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.59□□□□□ -2.15
SPG11Q96JI7 AC069234.5-201ENST00000611056 416 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 AC241377.1-201ENST00000619797 406 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 AC092447.7-201ENST00000422212 1621 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 AL450326.2-201ENST00000421913 1962 ntBASIC1.59□□□□□ -2.15
SPG11Q96JI7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
SPG11Q96JI7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.59□□□□□ -2.16
SPG11Q96JI7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SPG11Q96JI7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SPG11Q96JI7 Y_RNA.294-201ENST00000364916 102 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 RNU2-20P-201ENST00000410425 191 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 AC008173.1-201ENST00000418901 264 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.59□□□□□ -2.16
SPG11Q96JI7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.59□□□□□ -2.16
SPG11Q96JI7 AL049830.2-201ENST00000480072 201 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 FAM92A1P1-201ENST00000528023 890 ntBASIC1.59□□□□□ -2.16
SPG11Q96JI7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.59□□□□□ -2.16
SPG11Q96JI7 AC008015.1-201ENST00000555505 465 ntBASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms