Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 HMGB1P25-201ENST00000468402 607 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 RPL7P19-201ENST00000469948 618 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 Y_RNA.672-201ENST00000516289 104 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 RNU6-430P-201ENST00000517078 107 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 SETP7-201ENST00000552169 453 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 SETP2-201ENST00000553886 926 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC027807.1-201ENST00000559921 996 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 UBE2L4-201ENST00000587688 464 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC011468.4-201ENST00000603942 409 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC110741.2-201ENST00000605278 268 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 MIR6868-201ENST00000611215 58 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC072046.2-201ENST00000618366 268 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AL158801.5-201ENST00000623123 465 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 CR381572.1-201ENST00000625098 102 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 PISRT1-201ENST00000626175 531 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 MIR93-201ENST00000385024 80 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 RNU2-47P-201ENST00000410649 186 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 RNU6-195P-201ENST00000411352 109 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 JKAMPP1-201ENST00000413804 919 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 TOMM22P1-201ENST00000418578 312 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AL589872.1-201ENST00000426602 288 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 ISCA1P6-201ENST00000427740 390 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC009961.2-201ENST00000435771 251 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 RPS7P7-201ENST00000463499 571 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC105252.1-201ENST00000503089 286 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC107401.1-201ENST00000503426 685 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 NPM1P41-201ENST00000512920 831 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 IGKV2D-23-201ENST00000518179 286 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AP000907.2-201ENST00000530827 353 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC025884.1-201ENST00000556034 378 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC022968.1-201ENST00000567372 442 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AP003465.2-201ENST00000602571 373 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC119501.1-201ENST00000603646 475 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AL591034.3-201ENST00000605511 685 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC011816.2-201ENST00000607089 556 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AL355472.4-201ENST00000610233 626 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC091304.9-201ENST00000612091 226 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 OR5AK4P-201ENST00000635912 903 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 AC011460.1-201ENST00000636268 1834 ntBASIC4.51□□□□□ -1.69
CDK5RAP3Q96JB5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 RNA5SP443-201ENST00000363083 132 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 SNORA7.2-201ENST00000364446 145 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 RNU6-114P-201ENST00000384704 105 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 MRPL42P2-201ENST00000403169 426 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 FCF1P9-201ENST00000412546 282 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 RPL7AP73-201ENST00000413490 353 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AL691449.1-201ENST00000426570 421 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 ARPC3P1-201ENST00000437218 533 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 MTND1P1-201ENST00000445453 368 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC114755.5-201ENST00000447760 831 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 RPS3AP17-201ENST00000472594 777 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AL132838.2-201ENST00000492041 314 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 MTCO2P4-201ENST00000517968 247 ntBASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.5□□□□□ -1.69
CDK5RAP3Q96JB5 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms