Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RNU6-348P-201ENST00000384386 107 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 Y_RNA.548-201ENST00000384656 105 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 PPIAP31-201ENST00000405422 495 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RNA5SP239-201ENST00000410218 129 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RPS3AP3-201ENST00000411933 242 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 CCDC58P2-201ENST00000417131 366 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AC011742.1-201ENST00000431448 434 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 KCTD9P3-201ENST00000434597 1169 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RPL7P28-201ENST00000437739 740 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AL022238.1-201ENST00000442557 355 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RPL7P15-201ENST00000461190 712 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RN7SL132P-201ENST00000478131 296 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RPL31P61-201ENST00000496160 376 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AC010460.1-201ENST00000507087 466 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RN7SKP298-201ENST00000515950 94 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RNU6-1095P-201ENST00000516148 108 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 RNU6-405P-201ENST00000516637 110 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AP003467.2-201ENST00000520175 319 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AC103783.1-201ENST00000520506 373 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 BNIP3P5-201ENST00000562290 498 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 MTND1P15-201ENST00000579262 949 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 MIR3682-201ENST00000581338 84 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 UBE2L4-201ENST00000587688 464 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AC121334.2-201ENST00000605387 271 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AC009159.1-201ENST00000618386 642 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AL158801.5-201ENST00000623123 465 ntBASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHMP4CQ96CF2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 RNU6-335P-201ENST00000364563 113 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 RNU6-297P-201ENST00000384636 107 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 RN7SKP27-201ENST00000410684 333 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC078974.1-201ENST00000411597 223 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 RPL7AP73-201ENST00000413490 353 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 ZNF885P-201ENST00000420174 1098 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC092832.1-201ENST00000422934 400 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AL353777.1-201ENST00000425552 326 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC087650.1-201ENST00000431445 468 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AL356535.1-201ENST00000440335 398 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AL121871.1-201ENST00000443413 436 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC244505.5-201ENST00000443639 207 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 RPL17P49-201ENST00000443728 411 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC010655.1-201ENST00000449336 292 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 HMGB3P30-201ENST00000457863 606 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 KLF3P2-201ENST00000465138 268 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC110792.1-201ENST00000491826 472 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 Vault.1-201ENST00000516474 102 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 RNU6-352P-201ENST00000516908 107 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AP003392.2-201ENST00000527269 208 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC091516.1-201ENST00000549191 703 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 MIR4528-201ENST00000577763 90 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC005255.1-201ENST00000593748 216 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC020914.4-201ENST00000597690 277 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC068790.2-201ENST00000602601 557 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC078795.2-201ENST00000602835 1252 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC109347.2-201ENST00000610220 349 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC008498.1-201ENST00000613012 531 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 uc_338.32-201ENST00000615087 172 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 AC084035.1-201ENST00000634543 607 ntBASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4CQ96CF2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms