Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TTC28Q96AY4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TTC28Q96AY4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 RNU1-42P-201ENST00000364033 160 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 U8.8-201ENST00000365399 135 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 SNORA70.7-201ENST00000384159 133 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 AC006390.1-201ENST00000508068 283 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 RNU6-1334P-201ENST00000516032 105 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 PSMA6P4-201ENST00000603247 718 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 RNY1P4-201ENST00000384595 115 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.82□□□□□ -2.12
TTC28Q96AY4 ARPC3P1-201ENST00000437218 533 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 AC096992.1-201ENST00000459808 709 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.82□□□□□ -2.12
TTC28Q96AY4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TTC28Q96AY4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
TTC28Q96AY4 RPL23AP48-201ENST00000406913 488 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 RNU6-174P-201ENST00000410406 106 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 SDR42E1P3-201ENST00000438345 502 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 FGF7P3-201ENST00000454645 303 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.82□□□□□ -2.12
TTC28Q96AY4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.82□□□□□ -2.12
TTC28Q96AY4 AL121821.2-201ENST00000556081 394 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 SNORD53B-201ENST00000577887 78 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 AC245036.5-201ENST00000596330 847 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 AC025946.2-201ENST00000603398 234 ntBASIC1.82□□□□□ -2.12
TTC28Q96AY4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.82□□□□□ -2.12
TTC28Q96AY4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TTC28Q96AY4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TTC28Q96AY4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
TTC28Q96AY4 RNA5SP457-201ENST00000363657 124 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 SNORD21-201ENST00000383953 95 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 RNU6-1105P-201ENST00000384774 107 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 AC234781.4-201ENST00000419384 244 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 AC098934.3-201ENST00000430450 190 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.81□□□□□ -2.12
TTC28Q96AY4 RPS27P29-201ENST00000463110 252 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.81□□□□□ -2.12
TTC28Q96AY4 TTC39CP1-201ENST00000512513 755 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.81□□□□□ -2.12
TTC28Q96AY4 MIR4421-201ENST00000578133 69 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.81□□□□□ -2.12
TTC28Q96AY4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.81□□□□□ -2.12
TTC28Q96AY4 AC007342.7-201ENST00000624610 2337 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TTC28Q96AY4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TTC28Q96AY4 RNU1-93P-201ENST00000364704 169 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 SNORA51.4-201ENST00000364993 124 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 AMD1P2-201ENST00000412936 992 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.81□□□□□ -2.12
TTC28Q96AY4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.81□□□□□ -2.12
TTC28Q96AY4 AC021382.1-201ENST00000483523 359 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 IGLVIV-53-201ENST00000520107 367 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 BMS1P7-201ENST00000602440 1052 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 AL645944.1-201ENST00000603857 493 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 RNU6-84P-201ENST00000607737 102 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 AL353770.2-201ENST00000620024 78 ntBASIC1.81□□□□□ -2.12
TTC28Q96AY4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.81□□□□□ -2.12
TTC28Q96AY4 CDC27P3-201ENST00000635418 1910 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
TTC28Q96AY4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
TTC28Q96AY4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.8□□□□□ -2.12
TTC28Q96AY4 RN7SL297P-201ENST00000483161 293 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.8□□□□□ -2.12
TTC28Q96AY4 ZNF355P-201ENST00000427301 3216 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.8□□□□□ -2.12
TTC28Q96AY4 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TTC28Q96AY4 RNA5SP62-201ENST00000363457 110 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 RNU6-53P-201ENST00000365367 106 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TTC28Q96AY4 RNU1-138P-201ENST00000384093 164 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 TAS2R15P-201ENST00000390674 928 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 AL513331.1-201ENST00000411908 397 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 AC005534.2-201ENST00000431047 433 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.8□□□□□ -2.12
TTC28Q96AY4 COX6CP5-201ENST00000527162 228 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 MTND4P23-201ENST00000447723 1363 ntBASIC1.8□□□□□ -2.12
TTC28Q96AY4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TTC28Q96AY4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.79□□□□□ -2.12
TTC28Q96AY4 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.79□□□□□ -2.12
TTC28Q96AY4 CBWD4P-201ENST00000445695 655 ntBASIC1.79□□□□□ -2.12
TTC28Q96AY4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.79□□□□□ -2.12
TTC28Q96AY4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.79□□□□□ -2.12
TTC28Q96AY4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.79□□□□□ -2.12
TTC28Q96AY4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
TTC28Q96AY4 AL138787.1-202ENST00000437804 898 ntBASIC1.79□□□□□ -2.12
TTC28Q96AY4 AC068305.1-201ENST00000497406 726 ntBASIC1.79□□□□□ -2.12
TTC28Q96AY4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TTC28Q96AY4 AL356575.1-201ENST00000603008 283 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms