Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC47Q96A33 AC008155.2-201ENST00000464337 397 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 AC034236.1-201ENST00000469891 373 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 AP002812.1-201ENST00000495378 474 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC47Q96A33 AC113420.1-201ENST00000507903 571 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC47Q96A33 AP003102.1-201ENST00000525638 661 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 OR7K1P-201ENST00000546439 926 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC47Q96A33 MIR3912-201ENST00000577566 105 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 ZNF415P1-201ENST00000582279 1166 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 AC078899.3-201ENST00000599065 212 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 AC080013.4-201ENST00000607624 649 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 AC025588.4-201ENST00000615802 908 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 AC099506.2-201ENST00000623074 221 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 AC138915.1-201ENST00000565427 1685 ntBASIC3.48□□□□□ -1.85
CCDC47Q96A33 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC47Q96A33 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC47Q96A33 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC47Q96A33 RPL21P3-201ENST00000395517 478 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AL357075.1-201ENST00000404107 726 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 RNU4-47P-201ENST00000410876 114 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 ARL4AP4-201ENST00000434170 518 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 THAP5P1-201ENST00000439089 262 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AL592447.1-201ENST00000447592 540 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 MTCO3P11-201ENST00000455103 774 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC146507.2-201ENST00000460608 476 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 RN7SL863P-201ENST00000462370 296 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 RPL31P60-201ENST00000478450 367 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC069528.1-202ENST00000482888 637 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC009901.1-201ENST00000506703 541 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 MTCYBP16-201ENST00000509187 1129 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC47Q96A33 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 RPL21P12-201ENST00000559810 515 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC011260.1-201ENST00000578420 472 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC008739.3-201ENST00000603262 127 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 ELOCP35-201ENST00000604289 336 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AP000254.1-201ENST00000609934 520 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 AC009237.15-201ENST00000610252 501 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 DUXAP10-204ENST00000612052 616 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC47Q96A33 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC47Q96A33 CDR1-202ENST00000625883 1485 ntBASIC3.47□□□□□ -1.85
CCDC47Q96A33 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 DEFB108F-201ENST00000344638 222 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 DHFRP6-201ENST00000401776 268 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 RN7SKP220-201ENST00000410611 288 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 MRPS36P1-201ENST00000421291 307 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AL645937.1-202ENST00000421799 937 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AL353678.1-201ENST00000422735 741 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 RPL7P44-201ENST00000424827 742 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC011242.1-201ENST00000433596 1158 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 SNORA84-201ENST00000459229 133 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC104629.1-201ENST00000494226 508 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC006445.2-201ENST00000510061 472 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AL359273.1-201ENST00000510918 627 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 RNU6-1225P-201ENST00000516336 65 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 SNORA67.7-201ENST00000516664 135 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 HSPA8P13-201ENST00000523715 472 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 DEFB108D-201ENST00000527787 222 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC020895.1-201ENST00000595362 272 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC004853.1-201ENST00000604902 698 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC245389.1-201ENST00000605141 529 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 AC002064.3-201ENST00000623448 346 ntBASIC3.46□□□□□ -1.86
CCDC47Q96A33 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC47Q96A33 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC47Q96A33 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC47Q96A33 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC47Q96A33 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms