Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.17□□□□□ -1.74
USP38Q8NB14 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP38Q8NB14 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.17□□□□□ -1.74
USP38Q8NB14 CR381670.1-201ENST00000624291 1693 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.16□□□□□ -1.74
USP38Q8NB14 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP38Q8NB14 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.16□□□□□ -1.74
USP38Q8NB14 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP38Q8NB14 AL161781.1-201ENST00000354277 403 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 RNU6-744P-201ENST00000365557 107 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 RNU6-1316P-201ENST00000384242 108 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AL583834.1-201ENST00000406943 343 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 RNU2-47P-201ENST00000410649 186 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC109780.2-201ENST00000413467 845 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC017083.1-201ENST00000428093 483 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 MED14P1-201ENST00000430517 648 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.16□□□□□ -1.74
USP38Q8NB14 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC097262.1-201ENST00000452559 548 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 RPS27AP8-201ENST00000452665 445 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 KATNBL1P6-201ENST00000453433 915 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC025518.1-201ENST00000479856 347 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AP001025.2-201ENST00000490908 477 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC112198.1-201ENST00000505369 1220 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
USP38Q8NB14 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.16□□□□□ -1.74
USP38Q8NB14 POU5F1P7-201ENST00000508759 541 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.16□□□□□ -1.74
USP38Q8NB14 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC104984.5-201ENST00000586878 94 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC012493.2-201ENST00000595083 291 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC013444.2-201ENST00000603317 787 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC105129.3-201ENST00000605455 485 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC103710.3-201ENST00000608157 948 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.16□□□□□ -1.74
USP38Q8NB14 AC048344.4-201ENST00000619744 527 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC026422.1-201ENST00000623961 452 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 AC244205.2-202ENST00000635781 342 ntBASIC4.16□□□□□ -1.74
USP38Q8NB14 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP38Q8NB14 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP38Q8NB14 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP38Q8NB14 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP38Q8NB14 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP38Q8NB14 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
USP38Q8NB14 MAPK10-373ENST00000641983 6772 ntBASIC4.15□□□□□ -1.74
USP38Q8NB14 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USP38Q8NB14 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USP38Q8NB14 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
USP38Q8NB14 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.15□□□□□ -1.74
USP38Q8NB14 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USP38Q8NB14 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USP38Q8NB14 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP38Q8NB14 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP38Q8NB14 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AL356421.1-201ENST00000403255 413 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 MTCO1P17-201ENST00000411522 491 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AC244098.2-201ENST00000422068 99 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 AC005326.1-201ENST00000429197 123 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 Z83846.1-201ENST00000446798 265 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 RPS3AP46-201ENST00000448352 682 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 RPS17P13-201ENST00000448974 407 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 AL445669.2-201ENST00000454425 421 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AC023141.12-201ENST00000512399 199 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.15□□□□□ -1.75
USP38Q8NB14 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AC022695.1-201ENST00000522089 237 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 AP004247.1-201ENST00000531556 1289 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP38Q8NB14 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AP001004.1-201ENST00000582468 324 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AC004853.1-201ENST00000604902 698 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 YPEL5P2-201ENST00000605553 359 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
USP38Q8NB14 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.15□□□□□ -1.75
USP38Q8NB14 AC006927.3-201ENST00000638789 384 ntBASIC4.15□□□□□ -1.75
USP38Q8NB14 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
USP38Q8NB14 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP38Q8NB14 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP38Q8NB14 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
USP38Q8NB14 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.14□□□□□ -1.75
USP38Q8NB14 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP38Q8NB14 PABPC1P9-201ENST00000426076 1612 ntBASIC4.14□□□□□ -1.75
USP38Q8NB14 ELL2P3-201ENST00000457883 1602 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms