Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AL391417.1-201ENST00000404100 426 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 MTCO1P17-201ENST00000411522 491 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 RPL17P12-201ENST00000413391 526 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC009237.5-201ENST00000414271 501 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 RPL37P21-201ENST00000435890 276 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AP000542.1-201ENST00000448473 371 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 OR6K1P-201ENST00000456766 971 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AL136097.1-201ENST00000456945 913 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 RPL9P32-201ENST00000464118 620 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AP000797.1-201ENST00000478870 387 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC106707.2-201ENST00000484182 374 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 TXNP6-201ENST00000510190 310 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC021146.1-201ENST00000511202 716 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 PTGES3P3-201ENST00000511479 482 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 IGKV2-23-201ENST00000518729 323 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 MIR4307-201ENST00000582802 84 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AL669831.4-202ENST00000590817 238 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC119751.7-201ENST00000600494 245 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC012065.4-201ENST00000602445 679 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC008739.3-201ENST00000603262 127 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC128687.1-201ENST00000605304 619 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 BCRP9-201ENST00000605312 388 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC239868.4-201ENST00000608318 671 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC006329.2-201ENST00000611491 394 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AL596245.1-201ENST00000618994 362 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC119674.1-207ENST00000641355 633 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 AC009093.8-201ENST00000641769 292 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 MTND4P4-201ENST00000439033 1366 ntBASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH20Q8N6Y1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AL161781.1-201ENST00000354277 403 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 RNU6-989P-201ENST00000362756 107 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 RNU4-91P-201ENST00000364778 135 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 RNU6-744P-201ENST00000365557 107 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 RNU6-769P-201ENST00000384407 104 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 RNY3P10-201ENST00000384764 102 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 MIR670-201ENST00000390142 98 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 MTCYBP36-201ENST00000404146 440 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 RPL30P2-201ENST00000414021 291 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC127526.1-201ENST00000417526 366 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC069157.1-201ENST00000421749 137 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AL445669.1-201ENST00000426743 755 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC091286.1-201ENST00000431233 461 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 MTCYBP45-201ENST00000435243 565 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 HSPD1P21-201ENST00000436541 245 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AL353706.1-201ENST00000436728 494 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 CEACAMP4-201ENST00000457676 421 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 RNU6-956P-201ENST00000458868 103 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC023424.2-201ENST00000493479 777 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC093677.1-201ENST00000514414 678 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 Y_RNA.655-201ENST00000515919 96 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 RNU6-27P-201ENST00000516146 107 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC025881.1-201ENST00000518851 512 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AP000873.5-201ENST00000533906 236 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC107954.1-201ENST00000565906 727 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC010591.1-201ENST00000603941 649 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 MIR92B-201ENST00000607575 96 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 AC012531.5-201ENST00000611375 151 ntBASIC3.69□□□□□ -1.82
PCDH20Q8N6Y1 U73479.1-201ENST00000618062 168 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms