Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 FGF7P3-201ENST00000454645 303 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 MTCO1P42-201ENST00000457379 726 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AL121769.1-201ENST00000469473 401 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC034159.1-201ENST00000513885 583 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 TPMTP1-201ENST00000592307 737 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC024220.1-201ENST00000603675 484 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC007014.2-201ENST00000615581 479 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 RMST_9.1-201ENST00000619945 193 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC019226.1-201ENST00000625666 515 ntBASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UBE3BQ7Z3V4 AL592437.2-201ENST00000421655 2434 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 LINC02471-203ENST00000641941 4752 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 RNA5SP391-201ENST00000363456 119 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC016769.3-201ENST00000396562 315 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 YME1L1P1-201ENST00000429435 297 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC087650.1-201ENST00000431445 468 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AL121877.1-201ENST00000453704 622 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC146507.1-201ENST00000468335 354 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 RPL7L1P8-201ENST00000469911 741 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC022034.3-201ENST00000471393 478 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC068135.2-201ENST00000569293 1028 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC008739.3-201ENST00000603262 127 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC091965.4-201ENST00000607691 587 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 MIR6864-201ENST00000617935 70 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC233309.1-201ENST00000619522 751 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 AC011978.2-201ENST00000569835 2054 ntBASIC4.68□□□□□ -1.66
UBE3BQ7Z3V4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AC106871.1-201ENST00000568324 3102 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 RNA5SP119-201ENST00000362715 117 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 RNU6-343P-201ENST00000364709 104 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 MTCO1P17-201ENST00000411522 491 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 RPL30P16-201ENST00000419341 429 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 HMGN2P31-201ENST00000432430 273 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 WASF1P1-201ENST00000447560 1131 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AP000542.1-201ENST00000448473 371 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 BX322784.1-201ENST00000455793 1077 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 KCTD9P5-201ENST00000504141 1170 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 PRDX4P1-201ENST00000507189 574 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AC104057.1-201ENST00000515547 497 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AP003122.4-201ENST00000530980 758 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AC118273.2-201ENST00000532092 465 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 MIR548S-201ENST00000581352 82 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 MIR3922-201ENST00000585192 84 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AL359999.1-201ENST00000604513 294 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AL158209.2-201ENST00000619266 216 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AC244100.1-202ENST00000621554 382 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AC000123.2-201ENST00000623124 461 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AP006248.2-201ENST00000623309 592 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 PISRT1-201ENST00000626175 531 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 MAPK10-372ENST00000641954 3413 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 CCT4P2-201ENST00000233836 1548 ntBASIC4.67□□□□□ -1.66
UBE3BQ7Z3V4 AC130650.2-201ENST00000618736 2403 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms