Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RN7SL222P-201ENST00000476452 299 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC006499.3-201ENST00000506077 748 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC108078.2-201ENST00000510750 236 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 OR11H5P-201ENST00000554039 926 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC069061.3-201ENST00000582254 823 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AL121612.2-201ENST00000612261 482 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC133104.2-201ENST00000615272 193 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 uc_338.18-201ENST00000615451 175 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC055839.1-201ENST00000634467 498 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 AC008013.2-202ENST00000637965 364 ntBASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF111Q6ZNA4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.84□□□□□ -1.64
RNF111Q6ZNA4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.84□□□□□ -1.64
RNF111Q6ZNA4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF111Q6ZNA4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 Y_RNA.212-201ENST00000364177 102 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC117470.1-201ENST00000381974 330 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 SNORD116-11-201ENST00000383882 92 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 RNA5SP219-201ENST00000390940 113 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 RNU6-550P-201ENST00000391057 101 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 RN7SKP125-201ENST00000410481 302 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 RNU6-954P-201ENST00000411355 107 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 BX510359.3-201ENST00000422168 306 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC099336.2-201ENST00000422457 254 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 MTCYBP9-201ENST00000431021 303 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 RPL23AP89-201ENST00000439324 255 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AL035666.1-201ENST00000446195 348 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC099560.2-201ENST00000457554 255 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 CYCSP34-201ENST00000458172 304 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 SCARNA18-201ENST00000459004 134 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC006967.1-201ENST00000467608 589 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC002456.2-201ENST00000509356 380 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 MTCO3P44-201ENST00000510977 541 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 RNU6-976P-201ENST00000516086 111 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 RNU6-1092P-201ENST00000516955 87 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 OR10G5P-201ENST00000532733 358 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC135001.1-201ENST00000544546 283 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC004817.2-201ENST00000561794 651 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC008269.2-201ENST00000561915 1105 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC023043.2-201ENST00000589678 1026 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AP005432.2-201ENST00000608162 586 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC116447.1-201ENST00000613153 453 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AL353662.3-201ENST00000625131 237 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC010329.2-201ENST00000595195 2737 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC008079.2-201ENST00000623543 20396 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AL445437.1-201ENST00000623157 3087 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF111Q6ZNA4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF111Q6ZNA4 ZNF33CP-201ENST00000432492 2030 ntBASIC4.82□□□□□ -1.64
RNF111Q6ZNA4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF111Q6ZNA4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF111Q6ZNA4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF111Q6ZNA4 C4BPAP1-201ENST00000415474 1893 ntBASIC4.82□□□□□ -1.64
RNF111Q6ZNA4 AC108751.5-201ENST00000492880 1336 ntBASIC4.82□□□□□ -1.64
RNF111Q6ZNA4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF111Q6ZNA4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms