Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TPTE2P4-201ENST00000258589 1605 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 MIR554-201ENST00000384874 96 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-516P-201ENST00000411381 104 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AL008987.1-201ENST00000415528 237 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC017079.2-201ENST00000416102 485 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 HMGB3P20-201ENST00000417997 600 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 RPL36AP36-201ENST00000418616 301 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AL451062.2-201ENST00000427515 271 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 TXNL1P1-201ENST00000429528 554 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC099563.1-201ENST00000456086 418 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 RPL23AP14-201ENST00000468281 468 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 RN7SL330P-201ENST00000469709 307 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 PCBP2P3-201ENST00000509726 843 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 SNORD59.2-201ENST00000516873 68 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC026407.1-201ENST00000518369 204 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 MIR4425-201ENST00000580572 84 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC006539.2-201ENST00000601729 572 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC234772.3-201ENST00000602277 528 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 SNORA51-201ENST00000606420 132 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC243312.2-201ENST00000623340 601 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 PCMTD1P7-201ENST00000634506 357 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AL732372.2-225ENST00000642124 456 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 CEP170P1-201ENST00000502249 4587 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 AC005183.1-201ENST00000603687 1979 ntBASIC3.25□□□□□ -1.89
NHLRC1Q6VVB1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 Y_RNA.18-201ENST00000362461 102 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 RNA5SP51-201ENST00000364750 119 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-723P-201ENST00000383973 107 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 MIR1305-201ENST00000408300 86 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 SNORA57.3-201ENST00000411095 141 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 RPS3AP25-201ENST00000411660 793 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 RPL7P2-201ENST00000427639 268 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC090774.1-201ENST00000435925 246 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AL354941.1-201ENST00000438600 464 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 EEF1E1P1-201ENST00000446998 430 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC007967.1-201ENST00000455422 1159 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC092798.1-201ENST00000458542 409 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 POU5F1P7-201ENST00000508759 541 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 SAP18P1-201ENST00000512058 390 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 MTCYBP43-201ENST00000513621 740 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC034159.1-201ENST00000513885 583 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-840P-201ENST00000517275 65 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 RANP9-201ENST00000519957 271 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC020914.6-201ENST00000594327 272 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC079089.3-201ENST00000603094 673 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC004067.1-201ENST00000608733 700 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AP000254.1-201ENST00000609934 520 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC009464.1-201ENST00000615731 469 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AL138880.2-201ENST00000616214 239 ntBASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NHLRC1Q6VVB1 AC021755.1-201ENST00000559747 1447 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms