Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 ELL2P4-201ENST00000446870 1376 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AP004289.2-201ENST00000444413 1457 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 RNU1-94P-201ENST00000362627 173 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 Y_RNA.132-201ENST00000363421 102 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 RNU6-1243P-201ENST00000364028 107 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 RN7SKP280-201ENST00000364196 304 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 RNU6-39P-201ENST00000384344 107 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 MIR606-201ENST00000384851 96 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AL590762.2-201ENST00000395798 571 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 Z98745.1-201ENST00000402553 494 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AL592291.1-201ENST00000403830 352 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AL445189.1-201ENST00000405722 338 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 MIR548P-201ENST00000408336 84 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 MTCO2P27-201ENST00000420740 428 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 FTH1P1-201ENST00000437933 532 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 RPL21P99-201ENST00000480369 423 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC105137.1-201ENST00000484355 562 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC020890.1-201ENST00000491837 504 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 FTH1P21-201ENST00000512179 511 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 OR4P1P-201ENST00000530808 1136 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC020661.2-201ENST00000560114 134 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC110743.1-201ENST00000584870 478 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC008638.3-201ENST00000603341 463 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AL022345.1-201ENST00000607292 135 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC103710.3-201ENST00000608157 948 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC134503.1-201ENST00000633048 54 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC107068.1-201ENST00000563286 4218 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 MTCO1P9-201ENST00000505577 1534 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 AC011978.2-201ENST00000569835 2054 ntBASIC5.73□□□□□ -1.49
PRPF40BQ6NWY9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC027228.2-201ENST00000567141 2154 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RNU1-130P-201ENST00000363930 160 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RNU4-66P-201ENST00000365199 138 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RNU6-641P-201ENST00000384006 107 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RNU1-13P-201ENST00000384499 162 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RNA5SP317-201ENST00000410176 116 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RNA5SP311-201ENST00000411290 116 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RPL23AP26-201ENST00000412728 464 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC004987.3-201ENST00000413879 771 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC009302.1-201ENST00000417147 390 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 HSPE1P1-201ENST00000421494 318 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 Z95327.1-201ENST00000446082 482 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC104308.1-201ENST00000454621 333 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RPS29P15-201ENST00000458329 171 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC130509.1-201ENST00000464158 433 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RPS4XP10-201ENST00000465034 731 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RNA5SP315-201ENST00000516340 116 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 RNA5SP312-201ENST00000517068 116 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AP000827.1-201ENST00000527814 258 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC128657.1-201ENST00000549459 145 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 MIR3936-201ENST00000584304 110 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC245389.1-201ENST00000605141 529 ntBASIC5.72□□□□□ -1.49
PRPF40BQ6NWY9 AC021646.1-201ENST00000605469 484 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms