Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC103710.1-201ENST00000610003 901 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC007497.1-201ENST00000610421 561 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 MIR6820-201ENST00000611508 62 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC090970.3-201ENST00000612566 866 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC090132.2-201ENST00000615881 347 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 RN7SL722P-201ENST00000617780 284 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 RN7SL565P-201ENST00000618246 284 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 MIR6853-201ENST00000619642 74 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AL139089.1-201ENST00000620372 975 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 CR381572.2-201ENST00000624852 397 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 AC092447.7-201ENST00000422212 1621 ntBASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PPP4R4Q6NUP7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC006971.1-201ENST00000407916 4486 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 Y_RNA.3-201ENST00000362331 103 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 RNA5SP295-201ENST00000362655 121 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 TXNP7-201ENST00000406296 293 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 BX295541.1-201ENST00000417774 250 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 NRBF2P3-201ENST00000432731 865 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 RPL36AP13-201ENST00000457490 317 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC079804.1-201ENST00000461922 436 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC008481.1-201ENST00000463278 396 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 RBM43P1-201ENST00000476891 1081 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 RPL31P60-201ENST00000478450 367 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC004924.1-201ENST00000480160 781 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC105252.1-201ENST00000503089 286 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC005951.2-201ENST00000576282 495 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 MIR3167-201ENST00000579623 85 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC073648.5-201ENST00000603502 305 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC136475.10-201ENST00000620253 385 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC103858.2-201ENST00000621471 543 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AL359740.1-201ENST00000624340 592 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 MAPK10-253ENST00000641010 4072 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC116667.1-201ENST00000604855 2072 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 MTND5P26-201ENST00000426018 1752 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC010928.1-201ENST00000592477 1447 ntBASIC4.29□□□□□ -1.72
PPP4R4Q6NUP7 AC016588.2-201ENST00000632484 3021 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 OR1S2-201ENST00000302592 978 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RNU6-511P-201ENST00000363496 107 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 SNORA71.2-201ENST00000364941 134 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RNU1-39P-201ENST00000383897 165 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RNU6-278P-201ENST00000390945 109 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RN7SKP159-201ENST00000410657 292 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RN7SKP33-201ENST00000410942 340 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RPL21P24-201ENST00000413752 448 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RPS15AP12-201ENST00000419498 388 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RPL23AP25-201ENST00000430973 463 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 RPL31P35-201ENST00000431058 377 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 AC016831.4-201ENST00000438302 307 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 SSXP4-201ENST00000451349 245 ntBASIC4.28□□□□□ -1.72
PPP4R4Q6NUP7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms