Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 LINC00888-204ENST00000487386 421 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 RPS27P26-201ENST00000494583 239 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 NDUFB4P2-201ENST00000509515 391 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 SNORA31.18-201ENST00000517043 134 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 COX6B1P6-201ENST00000522347 255 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 COX6CP8-201ENST00000522620 226 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 CYCSP26-201ENST00000534107 320 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 MTCO1P40-201ENST00000574371 625 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 AC005229.3-201ENST00000603438 323 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 AC128687.1-201ENST00000605304 619 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 AL121917.1-203ENST00000605534 577 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 SNORD14A-201ENST00000606526 91 ntBASIC2.06□□□□□ -2.08
CCDC58Q4VC31 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC58Q4VC31 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 HSPE1P11-201ENST00000339579 310 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 MIR518C-201ENST00000384822 101 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AL591416.1-201ENST00000404015 867 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 KRR1P1-201ENST00000419430 803 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC063976.3-201ENST00000426849 329 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC009414.1-201ENST00000427200 443 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 ARL5AP4-201ENST00000430731 512 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC107083.1-201ENST00000439643 279 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC104629.2-201ENST00000468627 598 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC004263.1-201ENST00000479327 332 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC026436.1-201ENST00000510537 270 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC008494.2-201ENST00000514544 370 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 RNA5SP24-201ENST00000516478 95 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 RN7SKP96-201ENST00000516948 297 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 CR383656.14-201ENST00000551951 406 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 HSPE1P3-201ENST00000559254 309 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 AC053481.3-201ENST00000577881 843 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
CCDC58Q4VC31 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC58Q4VC31 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 MIR17-201ENST00000385012 84 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 MIR34A-201ENST00000385130 110 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 RN7SKP27-201ENST00000410684 333 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 RN7SKP140-201ENST00000411196 284 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AL030996.1-201ENST00000411430 235 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC073264.1-201ENST00000411508 416 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 MTATP6P11-201ENST00000428071 670 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 ELOCP3-201ENST00000439303 348 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AL022578.1-201ENST00000439330 1433 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 ZNF90P1-201ENST00000480493 1951 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC080014.1-201ENST00000496877 1201 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC096751.1-202ENST00000502691 1067 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC087359.1-201ENST00000508335 1740 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC118942.1-201ENST00000529674 1035 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 SERPINE4P-201ENST00000554978 281 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC023824.2-201ENST00000566185 400 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 MTCYBP28-201ENST00000566728 1132 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 MIR3944-201ENST00000581277 108 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC008749.1-201ENST00000597650 306 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC079089.3-201ENST00000603094 673 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC007179.3-201ENST00000604976 235 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC103810.6-201ENST00000606708 136 ntBASIC2.04□□□□□ -2.08
CCDC58Q4VC31 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC58Q4VC31 AC016252.1-201ENST00000609721 474 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms