Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 RNU6-28P-201ENST00000362378 107 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 Y_RNA.398-201ENST00000383952 99 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 SNORA24.1-201ENST00000384401 135 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 RNU6-394P-201ENST00000410735 107 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 RN7SKP51-201ENST00000410781 304 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 RNU4-78P-201ENST00000410940 126 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC010154.1-201ENST00000425857 269 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC087650.1-201ENST00000431445 468 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AL353997.1-201ENST00000432936 108 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC010881.1-201ENST00000433830 235 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 FTH1P1-201ENST00000437933 532 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC108734.1-201ENST00000439549 399 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 RPL21P89-201ENST00000444021 467 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 CEACAMP6-201ENST00000452007 574 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 RPL23AP31-201ENST00000456160 467 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC108059.3-201ENST00000456388 214 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC087477.1-201ENST00000465747 340 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC087884.1-201ENST00000469738 328 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC117503.1-201ENST00000472241 394 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 TOMM22P4-201ENST00000511318 336 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 RN7SKP260-201ENST00000516907 149 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 IGKV1-32-201ENST00000519290 311 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 AC012339.2-201ENST00000523996 453 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 BDP1P-201ENST00000582658 1990 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 MAPK10-263ENST00000641052 4307 ntBASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RSPO4Q2I0M5 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 EIF2AP4-201ENST00000424793 1781 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 RNU4-7P-201ENST00000364758 141 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 HSPA8P15-201ENST00000401676 786 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 RNU4-64P-201ENST00000410795 131 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 RNU2-6P-201ENST00000411404 190 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC009237.10-201ENST00000414112 510 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC114491.1-201ENST00000416095 246 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 RPL21P109-201ENST00000422213 475 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 DDX39BP1-205ENST00000422507 192 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AL451062.2-201ENST00000427515 271 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC006946.1-201ENST00000429106 328 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 BTF3P6-201ENST00000448054 499 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 RPL7AP10-201ENST00000481016 791 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 RPL7P23-201ENST00000493874 747 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC068305.1-201ENST00000497406 726 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AL359219.2-201ENST00000555184 348 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AL451044.1-201ENST00000604867 238 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC104465.1-201ENST00000611365 139 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 U6.106-201ENST00000636360 105 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 AC090740.1-201ENST00000623193 2262 ntBASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RSPO4Q2I0M5 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms