Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL133393.1-201ENST00000603277 287 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AC103710.4-201ENST00000609301 899 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AC099778.2-201ENST00000610904 211 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.28□□□□□ -1.88
SCN1BQ07699 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.28□□□□□ -1.88
SCN1BQ07699 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 OR5H6-203ENST00000642105 978 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 TPTE2P4-201ENST00000258589 1605 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCN1BQ07699 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCN1BQ07699 AL138713.1-201ENST00000624026 2130 ntBASIC3.28□□□□□ -1.89
SCN1BQ07699 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCN1BQ07699 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.27□□□□□ -1.89
SCN1BQ07699 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCN1BQ07699 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.27□□□□□ -1.89
SCN1BQ07699 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN1BQ07699 RNU6-1200P-201ENST00000384162 107 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 SOD2P1-201ENST00000396543 562 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 MTND1P21-201ENST00000412991 285 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC234781.2-201ENST00000426370 994 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN1BQ07699 AL354941.1-201ENST00000438600 464 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.27□□□□□ -1.89
SCN1BQ07699 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN1BQ07699 CDC27P1-201ENST00000445384 715 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 RPS3AP46-201ENST00000448352 682 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AL162389.1-201ENST00000449233 177 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 OR6C5P-201ENST00000452388 923 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AL109741.2-201ENST00000455561 343 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC026979.1-201ENST00000492525 396 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC135721.1-201ENST00000497954 479 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN1BQ07699 AC022447.3-201ENST00000506865 495 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC111000.2-201ENST00000507775 550 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN1BQ07699 POU5F1P7-201ENST00000508759 541 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN1BQ07699 AC023538.1-201ENST00000534576 736 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN1BQ07699 UBE2NP1-201ENST00000545592 458 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.27□□□□□ -1.89
SCN1BQ07699 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN1BQ07699 SETP2-201ENST00000553886 926 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN1BQ07699 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN1BQ07699 AC006116.10-201ENST00000591836 581 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 TPMTP1-201ENST00000592307 737 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN1BQ07699 AL139344.1-201ENST00000605228 195 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN1BQ07699 MIR6867-201ENST00000610636 67 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AL138880.2-201ENST00000616214 239 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AC007490.1-201ENST00000624321 703 ntBASIC3.27□□□□□ -1.89
SCN1BQ07699 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN1BQ07699 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCN1BQ07699 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN1BQ07699 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.27□□□□□ -1.89
SCN1BQ07699 MTND4P16-201ENST00000466108 1367 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN1BQ07699 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.26□□□□□ -1.89
SCN1BQ07699 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN1BQ07699 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SCN1BQ07699 CD24P4-201ENST00000382840 243 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 SNORA70C-201ENST00000384538 135 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SCN1BQ07699 RNU6-754P-201ENST00000391166 107 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 RNA5SP107-201ENST00000411358 122 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AL359704.1-201ENST00000411586 781 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 HIGD1AP15-201ENST00000416198 280 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 UBE2FP1-201ENST00000416536 447 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AL807761.1-201ENST00000417622 171 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 COX6CP17-201ENST00000421389 185 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN1BQ07699 FAM103A2P-201ENST00000444122 354 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.26□□□□□ -1.89
SCN1BQ07699 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN1BQ07699 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN1BQ07699 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SCN1BQ07699 AC010099.1-201ENST00000455434 375 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 ATG12P2-201ENST00000456830 416 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC104472.2-201ENST00000469035 601 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 RPL7P19-201ENST00000469948 618 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC084357.1-201ENST00000473404 255 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 CEACAMP10-202ENST00000495431 496 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC112198.1-201ENST00000505369 1220 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 OR5G4P-201ENST00000525251 760 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC068587.4-201ENST00000533893 186 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN1BQ07699 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN1BQ07699 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN1BQ07699 AL355836.1-201ENST00000555951 870 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC025884.1-201ENST00000556034 378 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN1BQ07699 OR4H12P-201ENST00000556269 907 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC037471.2-201ENST00000564941 598 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN1BQ07699 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.26□□□□□ -1.89
SCN1BQ07699 MIR544B-201ENST00000582372 78 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms